GenomeNet

Database: UniProt
Entry: F5YUL6_MYCSD
LinkDB: F5YUL6_MYCSD
Original site: F5YUL6_MYCSD 
ID   F5YUL6_MYCSD            Unreviewed;       479 AA.
AC   F5YUL6;
DT   27-JUL-2011, integrated into UniProtKB/TrEMBL.
DT   27-JUL-2011, sequence version 1.
DT   24-JAN-2024, entry version 57.
DE   SubName: Full=Transcriptional regulatory protein {ECO:0000313|EMBL:AEF35078.1};
GN   OrderedLocusNames=JDM601_1078 {ECO:0000313|EMBL:AEF35078.1};
OS   Mycolicibacter sinensis (strain JDM601) (Mycobacterium sinense).
OC   Bacteria; Actinomycetota; Actinomycetes; Mycobacteriales; Mycobacteriaceae;
OC   Mycolicibacter.
OX   NCBI_TaxID=875328 {ECO:0000313|EMBL:AEF35078.1, ECO:0000313|Proteomes:UP000009224};
RN   [1] {ECO:0000313|EMBL:AEF35078.1, ECO:0000313|Proteomes:UP000009224}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=JDM601 {ECO:0000313|EMBL:AEF35078.1,
RC   ECO:0000313|Proteomes:UP000009224};
RX   PubMed=21685274; DOI=10.1128/JB.05291-11;
RA   Zhang Z.Y., Sun Z.Q., Wang Z.L., Wen Z.L., Sun Q.W., Zhu Z.Q., Song Y.Z.,
RA   Zhao J.W., Wang H.H., Zhang S.L., Guo X.K.;
RT   "Complete genome sequence of a novel clinical isolate, the nontuberculous
RT   Mycobacterium strain JDM601.";
RL   J. Bacteriol. 193:4300-4301(2011).
CC   -!- SIMILARITY: Belongs to the short-chain fatty acyl-CoA assimilation
CC       regulator (ScfR) family. {ECO:0000256|ARBA:ARBA00007227}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; CP002329; AEF35078.1; -; Genomic_DNA.
DR   RefSeq; WP_013828021.1; NC_015576.1.
DR   AlphaFoldDB; F5YUL6; -.
DR   STRING; 875328.JDM601_1078; -.
DR   KEGG; mjd:JDM601_1078; -.
DR   eggNOG; COG1396; Bacteria.
DR   eggNOG; COG3800; Bacteria.
DR   HOGENOM; CLU_046383_0_0_11; -.
DR   OMA; FGGGCPK; -.
DR   OrthoDB; 9810578at2; -.
DR   Proteomes; UP000009224; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR   CDD; cd00093; HTH_XRE; 1.
DR   Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR   InterPro; IPR001387; Cro/C1-type_HTH.
DR   InterPro; IPR026281; HTH_RamB.
DR   InterPro; IPR010359; IrrE_HExxH.
DR   InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR   InterPro; IPR018653; ScfR_C.
DR   PANTHER; PTHR46797; HTH-TYPE TRANSCRIPTIONAL REGULATOR; 1.
DR   PANTHER; PTHR46797:SF1; METHYLPHOSPHONATE SYNTHASE; 1.
DR   Pfam; PF13560; HTH_31; 1.
DR   Pfam; PF06114; Peptidase_M78; 1.
DR   Pfam; PF09856; ScfRs; 1.
DR   PIRSF; PIRSF019251; Rv0465c; 1.
DR   SMART; SM00530; HTH_XRE; 1.
DR   SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR   PROSITE; PS50943; HTH_CROC1; 1.
PE   3: Inferred from homology;
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW   Reference proteome {ECO:0000313|Proteomes:UP000009224};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT   DOMAIN          14..68
FT                   /note="HTH cro/C1-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50943"
SQ   SEQUENCE   479 AA;  52748 MW;  0B7B798EC2621A26 CRC64;
     MAPSTTRTFA GARLRRLREE RGLTQVALAR ALNLSTSYVN QLENDQRPIT VPVLLALTDR
     FSLPAQYFSG DSDARLVADL RDMFTAAAGE HAASDSQIEE LVARMPDIGN SLLTMHRQLR
     GATEELESYR LRMSGDAAQP VAHPMPFEEV RDFFYDRSNY IAELDNAAEK LFIDTGMRFG
     GLDIQLSALL AEHFGITVAI VDDLPAGTKR LFDPATRVLR IAHWLLAGQR AFQMATQLAL
     LTQADLLSDI VAQDESLSPE SRGVARIGLA NYFAGAFLLP YRQFHRSATE LRYDIDLLGR
     RFEVGFETVC HRLSTLQRPG RRGVPFIFVR TDKAGNISKR QSATAFHFSR VGGSCPLWVV
     HDAFSQPGRI ITQVAQMPDG RKYFWIATTT PPEGRGYLGQ HKTFAVGLGC DLAHADKLVY
     STGVALDDQA TVVPIGAGCK ICDREACPQR AFPFLGRRVV VDENAGSGLP YSPVTAGGR
//
DBGET integrated database retrieval system