ID F5YUL6_MYCSD Unreviewed; 479 AA.
AC F5YUL6;
DT 27-JUL-2011, integrated into UniProtKB/TrEMBL.
DT 27-JUL-2011, sequence version 1.
DT 24-JAN-2024, entry version 57.
DE SubName: Full=Transcriptional regulatory protein {ECO:0000313|EMBL:AEF35078.1};
GN OrderedLocusNames=JDM601_1078 {ECO:0000313|EMBL:AEF35078.1};
OS Mycolicibacter sinensis (strain JDM601) (Mycobacterium sinense).
OC Bacteria; Actinomycetota; Actinomycetes; Mycobacteriales; Mycobacteriaceae;
OC Mycolicibacter.
OX NCBI_TaxID=875328 {ECO:0000313|EMBL:AEF35078.1, ECO:0000313|Proteomes:UP000009224};
RN [1] {ECO:0000313|EMBL:AEF35078.1, ECO:0000313|Proteomes:UP000009224}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JDM601 {ECO:0000313|EMBL:AEF35078.1,
RC ECO:0000313|Proteomes:UP000009224};
RX PubMed=21685274; DOI=10.1128/JB.05291-11;
RA Zhang Z.Y., Sun Z.Q., Wang Z.L., Wen Z.L., Sun Q.W., Zhu Z.Q., Song Y.Z.,
RA Zhao J.W., Wang H.H., Zhang S.L., Guo X.K.;
RT "Complete genome sequence of a novel clinical isolate, the nontuberculous
RT Mycobacterium strain JDM601.";
RL J. Bacteriol. 193:4300-4301(2011).
CC -!- SIMILARITY: Belongs to the short-chain fatty acyl-CoA assimilation
CC regulator (ScfR) family. {ECO:0000256|ARBA:ARBA00007227}.
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DR EMBL; CP002329; AEF35078.1; -; Genomic_DNA.
DR RefSeq; WP_013828021.1; NC_015576.1.
DR AlphaFoldDB; F5YUL6; -.
DR STRING; 875328.JDM601_1078; -.
DR KEGG; mjd:JDM601_1078; -.
DR eggNOG; COG1396; Bacteria.
DR eggNOG; COG3800; Bacteria.
DR HOGENOM; CLU_046383_0_0_11; -.
DR OMA; FGGGCPK; -.
DR OrthoDB; 9810578at2; -.
DR Proteomes; UP000009224; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00093; HTH_XRE; 1.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR026281; HTH_RamB.
DR InterPro; IPR010359; IrrE_HExxH.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR018653; ScfR_C.
DR PANTHER; PTHR46797; HTH-TYPE TRANSCRIPTIONAL REGULATOR; 1.
DR PANTHER; PTHR46797:SF1; METHYLPHOSPHONATE SYNTHASE; 1.
DR Pfam; PF13560; HTH_31; 1.
DR Pfam; PF06114; Peptidase_M78; 1.
DR Pfam; PF09856; ScfRs; 1.
DR PIRSF; PIRSF019251; Rv0465c; 1.
DR SMART; SM00530; HTH_XRE; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR PROSITE; PS50943; HTH_CROC1; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000009224};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 14..68
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000259|PROSITE:PS50943"
SQ SEQUENCE 479 AA; 52748 MW; 0B7B798EC2621A26 CRC64;
MAPSTTRTFA GARLRRLREE RGLTQVALAR ALNLSTSYVN QLENDQRPIT VPVLLALTDR
FSLPAQYFSG DSDARLVADL RDMFTAAAGE HAASDSQIEE LVARMPDIGN SLLTMHRQLR
GATEELESYR LRMSGDAAQP VAHPMPFEEV RDFFYDRSNY IAELDNAAEK LFIDTGMRFG
GLDIQLSALL AEHFGITVAI VDDLPAGTKR LFDPATRVLR IAHWLLAGQR AFQMATQLAL
LTQADLLSDI VAQDESLSPE SRGVARIGLA NYFAGAFLLP YRQFHRSATE LRYDIDLLGR
RFEVGFETVC HRLSTLQRPG RRGVPFIFVR TDKAGNISKR QSATAFHFSR VGGSCPLWVV
HDAFSQPGRI ITQVAQMPDG RKYFWIATTT PPEGRGYLGQ HKTFAVGLGC DLAHADKLVY
STGVALDDQA TVVPIGAGCK ICDREACPQR AFPFLGRRVV VDENAGSGLP YSPVTAGGR
//