ID F6EZM7_SPHCR Unreviewed; 275 AA.
AC F6EZM7;
DT 27-JUL-2011, integrated into UniProtKB/TrEMBL.
DT 27-JUL-2011, sequence version 1.
DT 27-MAR-2024, entry version 53.
DE SubName: Full=Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:AEG50211.1};
GN ORFNames=Sphch_2564 {ECO:0000313|EMBL:AEG50211.1};
OS Sphingobium chlorophenolicum L-1.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Sphingomonadaceae; Sphingobium.
OX NCBI_TaxID=690566 {ECO:0000313|EMBL:AEG50211.1, ECO:0000313|Proteomes:UP000007150};
RN [1] {ECO:0000313|EMBL:AEG50211.1, ECO:0000313|Proteomes:UP000007150}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=L-1 {ECO:0000313|EMBL:AEG50211.1,
RC ECO:0000313|Proteomes:UP000007150};
RG US DOE Joint Genome Institute;
RA Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S.,
RA Peters L., Daligault H., Han C., Tapia R., Land M., Hauser L., Kyrpides N.,
RA Ivanova N., Pagani I., Turner P., Copley S., Woyke T.;
RT "Complete sequence of chromosome 1 of Sphingobium chlorophenolicum L-1.";
RL Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|RuleBase:RU000408}.
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DR EMBL; CP002798; AEG50211.1; -; Genomic_DNA.
DR RefSeq; WP_013848448.1; NC_015593.1.
DR AlphaFoldDB; F6EZM7; -.
DR STRING; 690566.Sphch_2564; -.
DR KEGG; sch:Sphch_2564; -.
DR HOGENOM; CLU_1000973_0_0_5; -.
DR Proteomes; UP000007150; Chromosome 1.
DR GO; GO:0005829; C:cytosol; IEA:UniProt.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR CDD; cd04458; CSP_CDS; 2.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 2.
DR InterPro; IPR011129; CSD.
DR InterPro; IPR019844; CSD_1.
DR InterPro; IPR002059; CSP_DNA-bd.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR PANTHER; PTHR11544; COLD SHOCK DOMAIN CONTAINING PROTEINS; 1.
DR PANTHER; PTHR11544:SF60; LD37574P; 1.
DR Pfam; PF00313; CSD; 2.
DR PRINTS; PR00050; COLDSHOCK.
DR SMART; SM00357; CSP; 2.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 2.
DR PROSITE; PS00352; CSD_1; 1.
DR PROSITE; PS51857; CSD_2; 2.
PE 4: Predicted;
KW DNA-binding {ECO:0000313|EMBL:AEG50211.1}.
FT DOMAIN 104..169
FT /note="CSD"
FT /evidence="ECO:0000259|PROSITE:PS51857"
FT DOMAIN 206..272
FT /note="CSD"
FT /evidence="ECO:0000259|PROSITE:PS51857"
FT REGION 1..62
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 171..205
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..23
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 172..189
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 275 AA; 27736 MW; C77E9CB4FB6CCEE3 CRC64;
MSFDRGRRGG RGKDKRDGFG DEGFYEGGRG GFGGGDRFGG GGFGGGDRFG GGGGGGFGGD
RGGFGGGGGG GGGFRSGGGG GFGGGGGGFG GGRGGGMPAQ VVGEGTGVVK FFNGQKGFGF
IVRDDGGEDV FVHISAVEQA GLTGLAEGQQ LGFTLVDRGG KVSATDLKIE GEPLPVTDRP
REPREPRAGG FGGADRGPQR QLTGERASGT VKFFNAMKGF GFIQRDDGQP DAFVHISAVE
RAGMSALNEG DRLDFELEVD RRGKYAAVNL QTKAD
//
