ID F6GUA4_VITVI Unreviewed; 597 AA.
AC F6GUA4;
DT 27-JUL-2011, integrated into UniProtKB/TrEMBL.
DT 27-JUL-2011, sequence version 1.
DT 27-MAR-2024, entry version 58.
DE RecName: Full=DYW domain-containing protein {ECO:0000259|Pfam:PF14432};
GN OrderedLocusNames=VIT_06s0004g01520 {ECO:0000313|EMBL:CCB43746.1};
OS Vitis vinifera (Grape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; Vitales; Vitaceae; Viteae; Vitis.
OX NCBI_TaxID=29760 {ECO:0000313|EMBL:CCB43746.1, ECO:0000313|Proteomes:UP000009183};
RN [1] {ECO:0000313|Proteomes:UP000009183}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Pinot noir / PN40024 {ECO:0000313|Proteomes:UP000009183};
RX PubMed=17721507; DOI=10.1038/nature06148;
RG The French-Italian Public Consortium for Grapevine Genome Characterization.;
RA Jaillon O., Aury J.-M., Noel B., Policriti A., Clepet C., Casagrande A.,
RA Choisne N., Aubourg S., Vitulo N., Jubin C., Vezzi A., Legeai F.,
RA Hugueney P., Dasilva C., Horner D., Mica E., Jublot D., Poulain J.,
RA Bruyere C., Billault A., Segurens B., Gouyvenoux M., Ugarte E.,
RA Cattonaro F., Anthouard V., Vico V., Del Fabbro C., Alaux M.,
RA Di Gaspero G., Dumas V., Felice N., Paillard S., Juman I., Moroldo M.,
RA Scalabrin S., Canaguier A., Le Clainche I., Malacrida G., Durand E.,
RA Pesole G., Laucou V., Chatelet P., Merdinoglu D., Delledonne M.,
RA Pezzotti M., Lecharny A., Scarpelli C., Artiguenave F., Pe M.E., Valle G.,
RA Morgante M., Caboche M., Adam-Blondon A.-F., Weissenbach J., Quetier F.,
RA Wincker P.;
RT "The grapevine genome sequence suggests ancestral hexaploidization in major
RT angiosperm phyla.";
RL Nature 449:463-467(2007).
CC -!- SIMILARITY: Belongs to the PPR family. PCMP-H subfamily.
CC {ECO:0000256|ARBA:ARBA00006643}.
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DR EMBL; FN594951; CCB43746.1; -; Genomic_DNA.
DR AlphaFoldDB; F6GUA4; -.
DR PaxDb; 29760-VIT_06s0004g01520-t01; -.
DR EnsemblPlants; Vitvi06g00159_t001; Vitvi06g00159_P001; Vitvi06g00159.
DR Gramene; Vitvi06g00159_t001; Vitvi06g00159_P001; Vitvi06g00159.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_37_2_1; -.
DR InParanoid; F6GUA4; -.
DR Proteomes; UP000009183; Chromosome 6.
DR ExpressionAtlas; F6GUA4; baseline and differential.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0009451; P:RNA modification; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR InterPro; IPR032867; DYW_dom.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR046849; Eplus_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 4.
DR PANTHER; PTHR47928:SF65; DYW DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR47928; REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED; 1.
DR Pfam; PF14432; DYW_deaminase; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF20430; Eplus_motif; 1.
DR Pfam; PF01535; PPR; 2.
DR Pfam; PF13041; PPR_2; 2.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 3.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000009183};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 155..185
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 186..220
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 289..323
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 504..597
FT /note="DYW"
FT /evidence="ECO:0000259|Pfam:PF14432"
SQ SEQUENCE 597 AA; 67168 MW; 464D558E24570F0A CRC64;
MNQIKQTHAH LITTGLILHP ITANKLLKVL IASSFGSLSY AHQLFDQIPK PDVFIYNTMI
KAHAVIPTSS HNSMRIFLSM VRVSGFLPNR YTFVFVFKAC GNGLGVLEGE QIRVHAIKIG
LESNLFVTNA MIRMYANWGL VDEARRVFDW SLDQDLYSWN IMIGGYVGSG EIGRAKEMFD
EMSERDVVSW TTIIAGYVQV GCFKEALDLF HEMLQTGPPP NEFTLASALA ACANLVALDQ
GRWIHVYIDK SEIKMNERLL ASLLDMYAKC GEIDFAAKVF HDEYGLKLKV WPWNAMIGGY
AMHGKSKEAI DLFEQMKVEK VSPNKVTFVA LLNACSHGKL VEEGRGYFKS MASSYGIEPE
IEHYGCMVDL LGRSGLLKEA EETVFNMPMA PDATIWGALL GACRIHKDIE RGQRIGKIIK
ELDSDHIGCH VLLANLYSAS GQWDEAKAVR QKIEVSGRKK TPGCSSIELN GVFHQFLVGD
RSHPQTKQLY LFLDEMTTKL KNAGYVPEFG EVLLDIDDEE DKETALSKHS EKLAIAFGLI
NTPPGTAIRI VKNLRVCADC HEATKFISKV YKREIIVRDR IRYHHFKDGF CSCKDYW
//
