ID F6GUN5_VITVI Unreviewed; 405 AA.
AC F6GUN5;
DT 27-JUL-2011, integrated into UniProtKB/TrEMBL.
DT 27-JUL-2011, sequence version 1.
DT 24-JAN-2024, entry version 63.
DE RecName: Full=Large ribosomal subunit protein uL4 C-terminal domain-containing protein {ECO:0000259|Pfam:PF14374};
GN OrderedLocusNames=VIT_06s0004g00360 {ECO:0000313|EMBL:CCB43812.1};
OS Vitis vinifera (Grape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; Vitales; Vitaceae; Viteae; Vitis.
OX NCBI_TaxID=29760 {ECO:0000313|EMBL:CCB43812.1, ECO:0000313|Proteomes:UP000009183};
RN [1] {ECO:0000313|Proteomes:UP000009183}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Pinot noir / PN40024 {ECO:0000313|Proteomes:UP000009183};
RX PubMed=17721507; DOI=10.1038/nature06148;
RG The French-Italian Public Consortium for Grapevine Genome Characterization.;
RA Jaillon O., Aury J.-M., Noel B., Policriti A., Clepet C., Casagrande A.,
RA Choisne N., Aubourg S., Vitulo N., Jubin C., Vezzi A., Legeai F.,
RA Hugueney P., Dasilva C., Horner D., Mica E., Jublot D., Poulain J.,
RA Bruyere C., Billault A., Segurens B., Gouyvenoux M., Ugarte E.,
RA Cattonaro F., Anthouard V., Vico V., Del Fabbro C., Alaux M.,
RA Di Gaspero G., Dumas V., Felice N., Paillard S., Juman I., Moroldo M.,
RA Scalabrin S., Canaguier A., Le Clainche I., Malacrida G., Durand E.,
RA Pesole G., Laucou V., Chatelet P., Merdinoglu D., Delledonne M.,
RA Pezzotti M., Lecharny A., Scarpelli C., Artiguenave F., Pe M.E., Valle G.,
RA Morgante M., Caboche M., Adam-Blondon A.-F., Weissenbach J., Quetier F.,
RA Wincker P.;
RT "The grapevine genome sequence suggests ancestral hexaploidization in major
RT angiosperm phyla.";
RL Nature 449:463-467(2007).
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL4 family.
CC {ECO:0000256|ARBA:ARBA00010528}.
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DR EMBL; FN594951; CCB43812.1; -; Genomic_DNA.
DR RefSeq; XP_002285741.1; XM_002285705.4.
DR AlphaFoldDB; F6GUN5; -.
DR STRING; 29760.F6GUN5; -.
DR PaxDb; 29760-VIT_06s0004g00360-t01; -.
DR EnsemblPlants; Vitvi06g00041_t001; Vitvi06g00041_P001; Vitvi06g00041.
DR GeneID; 100251826; -.
DR Gramene; Vitvi06g00041_t001; Vitvi06g00041_P001; Vitvi06g00041.
DR KEGG; vvi:100251826; -.
DR eggNOG; KOG1475; Eukaryota.
DR HOGENOM; CLU_026535_3_0_1; -.
DR InParanoid; F6GUN5; -.
DR OrthoDB; 275636at2759; -.
DR Proteomes; UP000009183; Chromosome 6.
DR GO; GO:0022625; C:cytosolic large ribosomal subunit; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR Gene3D; 3.40.1370.10; -; 1.
DR InterPro; IPR025755; Ribos_uL4_C_dom.
DR InterPro; IPR002136; Ribosomal_uL4.
DR InterPro; IPR023574; Ribosomal_uL4_dom_sf.
DR InterPro; IPR013000; Ribosomal_uL4_euk/arc_CS.
DR InterPro; IPR045240; Ribosomal_uL4_euk/arch.
DR PANTHER; PTHR19431; 60S RIBOSOMAL PROTEIN L4; 1.
DR PANTHER; PTHR19431:SF0; 60S RIBOSOMAL PROTEIN L4; 1.
DR Pfam; PF14374; Ribos_L4_asso_C; 1.
DR Pfam; PF00573; Ribosomal_L4; 1.
DR SUPFAM; SSF52166; Ribosomal protein L4; 1.
DR PROSITE; PS00939; RIBOSOMAL_L1E; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000009183};
KW Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274};
KW Ribosomal protein {ECO:0000256|ARBA:ARBA00022980}.
FT DOMAIN 280..352
FT /note="Large ribosomal subunit protein uL4 C-terminal"
FT /evidence="ECO:0000259|Pfam:PF14374"
FT REGION 54..95
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 54..73
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 405 AA; 44564 MW; FD967B4558CB4D24 CRC64;
MAAAARPLVT VQVLKSDMAT DGGNAVPLPD VMKASIRPDI VNFVHSNISK NSRQPYAVSR
RAGHQTSAES WGTGRAVSRI PRVPGGGTHR AGQGAFGNMC RGGRMFAPTK IWRRWHRKIN
VNQKRYAVVS AIAASAVPSL VMARGHRIES VPELPLVIGD SAESVEKTSA AIDILKQVGA
YPDAEKAKDS HGIRPGKGKM RNRRYISRKG PLIVYGTEGA KLVKAFRNIP GVEVANVERL
NLLKLAPGGH LGRFIIWTKS AIEKVDSIYG SFDKTSEKKK GYLLPRAKMV NADLARIINS
DEVQSVVRPI KKEVKRAPMK KNPLKNLNTM LKLNPYAKTA RRMALLAEAQ RVKAKKEKLD
KKRAQIPKEE AAAIKAAGKA WYQTMISDSD YTEFDNFSKW LGVSQ
//
