ID F6H0P3_VITVI Unreviewed; 614 AA.
AC F6H0P3;
DT 27-JUL-2011, integrated into UniProtKB/TrEMBL.
DT 27-JUL-2011, sequence version 1.
DT 27-MAR-2024, entry version 58.
DE RecName: Full=Pentatricopeptide repeat-containing protein {ECO:0008006|Google:ProtNLM};
GN OrderedLocusNames=VIT_18s0001g04590 {ECO:0000313|EMBL:CCB45540.1};
OS Vitis vinifera (Grape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; Vitales; Vitaceae; Viteae; Vitis.
OX NCBI_TaxID=29760 {ECO:0000313|EMBL:CCB45540.1, ECO:0000313|Proteomes:UP000009183};
RN [1] {ECO:0000313|Proteomes:UP000009183}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Pinot noir / PN40024 {ECO:0000313|Proteomes:UP000009183};
RX PubMed=17721507; DOI=10.1038/nature06148;
RG The French-Italian Public Consortium for Grapevine Genome Characterization.;
RA Jaillon O., Aury J.-M., Noel B., Policriti A., Clepet C., Casagrande A.,
RA Choisne N., Aubourg S., Vitulo N., Jubin C., Vezzi A., Legeai F.,
RA Hugueney P., Dasilva C., Horner D., Mica E., Jublot D., Poulain J.,
RA Bruyere C., Billault A., Segurens B., Gouyvenoux M., Ugarte E.,
RA Cattonaro F., Anthouard V., Vico V., Del Fabbro C., Alaux M.,
RA Di Gaspero G., Dumas V., Felice N., Paillard S., Juman I., Moroldo M.,
RA Scalabrin S., Canaguier A., Le Clainche I., Malacrida G., Durand E.,
RA Pesole G., Laucou V., Chatelet P., Merdinoglu D., Delledonne M.,
RA Pezzotti M., Lecharny A., Scarpelli C., Artiguenave F., Pe M.E., Valle G.,
RA Morgante M., Caboche M., Adam-Blondon A.-F., Weissenbach J., Quetier F.,
RA Wincker P.;
RT "The grapevine genome sequence suggests ancestral hexaploidization in major
RT angiosperm phyla.";
RL Nature 449:463-467(2007).
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DR EMBL; FN595227; CCB45540.1; -; Genomic_DNA.
DR RefSeq; XP_010664278.1; XM_010665976.2.
DR AlphaFoldDB; F6H0P3; -.
DR STRING; 29760.F6H0P3; -.
DR PaxDb; 29760-VIT_18s0001g04590-t01; -.
DR EnsemblPlants; Vitvi18g00350_t001; Vitvi18g00350_P001; Vitvi18g00350.
DR GeneID; 100252377; -.
DR Gramene; Vitvi18g00350_t001; Vitvi18g00350_P001; Vitvi18g00350.
DR KEGG; vvi:100252377; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_0_1_1; -.
DR InParanoid; F6H0P3; -.
DR OrthoDB; 1215551at2759; -.
DR Proteomes; UP000009183; Chromosome 18.
DR GO; GO:0043231; C:intracellular membrane-bounded organelle; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0009451; P:RNA modification; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 5.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 7.
DR PANTHER; PTHR47928:SF43; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN CHLOROPLASTIC; 1.
DR PANTHER; PTHR47928; REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED; 1.
DR Pfam; PF01535; PPR; 4.
DR Pfam; PF13041; PPR_2; 3.
DR PROSITE; PS51375; PPR; 6.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000009183};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 147..181
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 247..281
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 348..382
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 449..483
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 519..549
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 550..584
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 614 AA; 68700 MW; 739913F309428047 CRC64;
MLAPQITLFQ PPSLFTIRRS QSPEPRKNSK TWKSNCKSPT NFLCFSLKTS SSTTEFSNSC
KFLSSHKNPD AGFLNVQPIV GHVNANLLAF WLQSCCTVRE VRRVHAVVFK CLDNSVTYVN
NNLISAYSRF GKLVEARKVF DKMPERNVVS WTAVVNGYSR YGFDDEALRL FDDCIENGVR
ANGKTFVCVL NLCSKRLDFE LGRQIHACIV KDNWRNLIVD SALVCFYAQC GDLSGAFHAF
DQMPERDVVC WTTMITACSQ QGRGTEALSM FSQMMFNTSS PNEFTVCSVL KACGEEKALE
FGKQLHGAII KKMFKEDVFI GTSLVGMYAK CGEILDSRKV FDGMKKRNTV TWTSIIAGYA
RNGQGEEAIS LFRVMKRRKI FANNLTVVSI LRACGSTRNL LMGKEVHAQI MKNSMQSNIY
IGSTLVWFYC KCEEHPFASK VLQNMPLRDV VSWTAIISGY TSLGHEPEAL EFLKEMLEEG
VEPNPFTYSS ALKACAHLEA ILQGKLIHSS VNKTLALSNV FVGSALINMY AKCGYVSEAI
QVFDSMPQRN LVSWKAMIVG YARNGLCGEA LKLMYRMQAE GIEVDDYILT TVLSACGDVE
WNMESSSDHC LQSS
//
