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Database: UniProt
Entry: F6H6Q2_VITVI
LinkDB: F6H6Q2_VITVI
Original site: F6H6Q2_VITVI 
ID   F6H6Q2_VITVI            Unreviewed;       509 AA.
AC   F6H6Q2;
DT   27-JUL-2011, integrated into UniProtKB/TrEMBL.
DT   27-JUL-2011, sequence version 1.
DT   08-NOV-2023, entry version 56.
DE   RecName: Full=Pentatricopeptide repeat-containing protein {ECO:0008006|Google:ProtNLM};
GN   OrderedLocusNames=VIT_16s0050g00040 {ECO:0000313|EMBL:CCB47895.1};
OS   Vitis vinifera (Grape).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; Vitales; Vitaceae; Viteae; Vitis.
OX   NCBI_TaxID=29760 {ECO:0000313|EMBL:CCB47895.1, ECO:0000313|Proteomes:UP000009183};
RN   [1] {ECO:0000313|Proteomes:UP000009183}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Pinot noir / PN40024 {ECO:0000313|Proteomes:UP000009183};
RX   PubMed=17721507; DOI=10.1038/nature06148;
RG   The French-Italian Public Consortium for Grapevine Genome Characterization.;
RA   Jaillon O., Aury J.-M., Noel B., Policriti A., Clepet C., Casagrande A.,
RA   Choisne N., Aubourg S., Vitulo N., Jubin C., Vezzi A., Legeai F.,
RA   Hugueney P., Dasilva C., Horner D., Mica E., Jublot D., Poulain J.,
RA   Bruyere C., Billault A., Segurens B., Gouyvenoux M., Ugarte E.,
RA   Cattonaro F., Anthouard V., Vico V., Del Fabbro C., Alaux M.,
RA   Di Gaspero G., Dumas V., Felice N., Paillard S., Juman I., Moroldo M.,
RA   Scalabrin S., Canaguier A., Le Clainche I., Malacrida G., Durand E.,
RA   Pesole G., Laucou V., Chatelet P., Merdinoglu D., Delledonne M.,
RA   Pezzotti M., Lecharny A., Scarpelli C., Artiguenave F., Pe M.E., Valle G.,
RA   Morgante M., Caboche M., Adam-Blondon A.-F., Weissenbach J., Quetier F.,
RA   Wincker P.;
RT   "The grapevine genome sequence suggests ancestral hexaploidization in major
RT   angiosperm phyla.";
RL   Nature 449:463-467(2007).
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DR   EMBL; FN595243; CCB47895.1; -; Genomic_DNA.
DR   AlphaFoldDB; F6H6Q2; -.
DR   PaxDb; 29760-VIT_16s0050g00040-t01; -.
DR   EnsemblPlants; Vitvi16g01014_t001; Vitvi16g01014_P001; Vitvi16g01014.
DR   Gramene; Vitvi16g01014_t001; Vitvi16g01014_P001; Vitvi16g01014.
DR   eggNOG; KOG4197; Eukaryota.
DR   HOGENOM; CLU_002706_0_6_1; -.
DR   InParanoid; F6H6Q2; -.
DR   Proteomes; UP000009183; Chromosome 16.
DR   GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR   GO; GO:0009451; P:RNA modification; IBA:GO_Central.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR   InterPro; IPR046848; E_motif.
DR   InterPro; IPR002885; Pentatricopeptide_rpt.
DR   InterPro; IPR046960; PPR_At4g14850-like_plant.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   NCBIfam; TIGR00756; PPR; 7.
DR   PANTHER; PTHR47926; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR   PANTHER; PTHR47926:SF339; UMP-CMP KINASE; 1.
DR   Pfam; PF20431; E_motif; 1.
DR   Pfam; PF01535; PPR; 4.
DR   Pfam; PF12854; PPR_1; 1.
DR   Pfam; PF13041; PPR_2; 3.
DR   SUPFAM; SSF48452; TPR-like; 1.
DR   PROSITE; PS51375; PPR; 5.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000009183};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT   REPEAT          18..52
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          130..160
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          161..195
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          223..257
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          323..357
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ   SEQUENCE   509 AA;  56781 MW;  854BC80C715EB0DF CRC64;
     MEYPSLVFSQ LGGVFNTDIM IWNGMIRGYA YNGPVDRCIS MFDEMLQRGL KPNNFTYPYV
     LSSCSEMGCF GRGRKVHAQI MKSGFESNFI VADSLLNMYI KMSDSFELGG VRNGKLNDAR
     MIFNGICVKP VELWNRMISK YVSNGDVESA RQLFDNMPER DVISWNSMIS GYARIGDVAN
     ARYLFEQMPE KNVVTWTSMI GAYSGSGDLE TAACLFEKMP CRNAVSWNAM ISSYTQNGKY
     EKSLDLFVKM QLEGVDSDGF TFVSVLSACS NLGALEFGKW VHSLIKDWSQ LGVIVGTALM
     EMYAKCGDVN RAFAVFVKLG NKDVFCWNVM IKSLAIHGRT EDAVKLFFLM QKIGLKPNGY
     TFSSALFACS HGGLVEVGRE IFYGMERDFG VCPKLEHFGC LIDLLSRNGR LEEAEALVRE
     MPFEPDIAIW GALLGGCRVK SDLKLAEEVV ERAGGLEANE SGVYVLLSNI YASAGQWPEA
     LSAREKMEEK KVWKKAGCSS VIHDIHMDV
//
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