ID F6H6Q2_VITVI Unreviewed; 509 AA.
AC F6H6Q2;
DT 27-JUL-2011, integrated into UniProtKB/TrEMBL.
DT 27-JUL-2011, sequence version 1.
DT 08-NOV-2023, entry version 56.
DE RecName: Full=Pentatricopeptide repeat-containing protein {ECO:0008006|Google:ProtNLM};
GN OrderedLocusNames=VIT_16s0050g00040 {ECO:0000313|EMBL:CCB47895.1};
OS Vitis vinifera (Grape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; Vitales; Vitaceae; Viteae; Vitis.
OX NCBI_TaxID=29760 {ECO:0000313|EMBL:CCB47895.1, ECO:0000313|Proteomes:UP000009183};
RN [1] {ECO:0000313|Proteomes:UP000009183}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Pinot noir / PN40024 {ECO:0000313|Proteomes:UP000009183};
RX PubMed=17721507; DOI=10.1038/nature06148;
RG The French-Italian Public Consortium for Grapevine Genome Characterization.;
RA Jaillon O., Aury J.-M., Noel B., Policriti A., Clepet C., Casagrande A.,
RA Choisne N., Aubourg S., Vitulo N., Jubin C., Vezzi A., Legeai F.,
RA Hugueney P., Dasilva C., Horner D., Mica E., Jublot D., Poulain J.,
RA Bruyere C., Billault A., Segurens B., Gouyvenoux M., Ugarte E.,
RA Cattonaro F., Anthouard V., Vico V., Del Fabbro C., Alaux M.,
RA Di Gaspero G., Dumas V., Felice N., Paillard S., Juman I., Moroldo M.,
RA Scalabrin S., Canaguier A., Le Clainche I., Malacrida G., Durand E.,
RA Pesole G., Laucou V., Chatelet P., Merdinoglu D., Delledonne M.,
RA Pezzotti M., Lecharny A., Scarpelli C., Artiguenave F., Pe M.E., Valle G.,
RA Morgante M., Caboche M., Adam-Blondon A.-F., Weissenbach J., Quetier F.,
RA Wincker P.;
RT "The grapevine genome sequence suggests ancestral hexaploidization in major
RT angiosperm phyla.";
RL Nature 449:463-467(2007).
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; FN595243; CCB47895.1; -; Genomic_DNA.
DR AlphaFoldDB; F6H6Q2; -.
DR PaxDb; 29760-VIT_16s0050g00040-t01; -.
DR EnsemblPlants; Vitvi16g01014_t001; Vitvi16g01014_P001; Vitvi16g01014.
DR Gramene; Vitvi16g01014_t001; Vitvi16g01014_P001; Vitvi16g01014.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_0_6_1; -.
DR InParanoid; F6H6Q2; -.
DR Proteomes; UP000009183; Chromosome 16.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0009451; P:RNA modification; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR046960; PPR_At4g14850-like_plant.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 7.
DR PANTHER; PTHR47926; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR47926:SF339; UMP-CMP KINASE; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 4.
DR Pfam; PF12854; PPR_1; 1.
DR Pfam; PF13041; PPR_2; 3.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 5.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000009183};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 18..52
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 130..160
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 161..195
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 223..257
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 323..357
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 509 AA; 56781 MW; 854BC80C715EB0DF CRC64;
MEYPSLVFSQ LGGVFNTDIM IWNGMIRGYA YNGPVDRCIS MFDEMLQRGL KPNNFTYPYV
LSSCSEMGCF GRGRKVHAQI MKSGFESNFI VADSLLNMYI KMSDSFELGG VRNGKLNDAR
MIFNGICVKP VELWNRMISK YVSNGDVESA RQLFDNMPER DVISWNSMIS GYARIGDVAN
ARYLFEQMPE KNVVTWTSMI GAYSGSGDLE TAACLFEKMP CRNAVSWNAM ISSYTQNGKY
EKSLDLFVKM QLEGVDSDGF TFVSVLSACS NLGALEFGKW VHSLIKDWSQ LGVIVGTALM
EMYAKCGDVN RAFAVFVKLG NKDVFCWNVM IKSLAIHGRT EDAVKLFFLM QKIGLKPNGY
TFSSALFACS HGGLVEVGRE IFYGMERDFG VCPKLEHFGC LIDLLSRNGR LEEAEALVRE
MPFEPDIAIW GALLGGCRVK SDLKLAEEVV ERAGGLEANE SGVYVLLSNI YASAGQWPEA
LSAREKMEEK KVWKKAGCSS VIHDIHMDV
//