ID F6HQU9_VITVI Unreviewed; 749 AA.
AC F6HQU9;
DT 27-JUL-2011, integrated into UniProtKB/TrEMBL.
DT 27-JUL-2011, sequence version 1.
DT 24-JAN-2024, entry version 67.
DE RecName: Full=Pentatricopeptide repeat-containing protein, chloroplastic {ECO:0008006|Google:ProtNLM};
GN OrderedLocusNames=VIT_08s0040g03280 {ECO:0000313|EMBL:CCB56997.1};
OS Vitis vinifera (Grape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; Vitales; Vitaceae; Viteae; Vitis.
OX NCBI_TaxID=29760 {ECO:0000313|EMBL:CCB56997.1, ECO:0000313|Proteomes:UP000009183};
RN [1] {ECO:0000313|Proteomes:UP000009183}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Pinot noir / PN40024 {ECO:0000313|Proteomes:UP000009183};
RX PubMed=17721507; DOI=10.1038/nature06148;
RG The French-Italian Public Consortium for Grapevine Genome Characterization.;
RA Jaillon O., Aury J.-M., Noel B., Policriti A., Clepet C., Casagrande A.,
RA Choisne N., Aubourg S., Vitulo N., Jubin C., Vezzi A., Legeai F.,
RA Hugueney P., Dasilva C., Horner D., Mica E., Jublot D., Poulain J.,
RA Bruyere C., Billault A., Segurens B., Gouyvenoux M., Ugarte E.,
RA Cattonaro F., Anthouard V., Vico V., Del Fabbro C., Alaux M.,
RA Di Gaspero G., Dumas V., Felice N., Paillard S., Juman I., Moroldo M.,
RA Scalabrin S., Canaguier A., Le Clainche I., Malacrida G., Durand E.,
RA Pesole G., Laucou V., Chatelet P., Merdinoglu D., Delledonne M.,
RA Pezzotti M., Lecharny A., Scarpelli C., Artiguenave F., Pe M.E., Valle G.,
RA Morgante M., Caboche M., Adam-Blondon A.-F., Weissenbach J., Quetier F.,
RA Wincker P.;
RT "The grapevine genome sequence suggests ancestral hexaploidization in major
RT angiosperm phyla.";
RL Nature 449:463-467(2007).
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DR EMBL; FN596008; CCB56997.1; -; Genomic_DNA.
DR RefSeq; XP_002273172.1; XM_002273136.4.
DR AlphaFoldDB; F6HQU9; -.
DR STRING; 29760.F6HQU9; -.
DR PaxDb; 29760-VIT_08s0040g03280-t01; -.
DR EnsemblPlants; Vitvi08g01156_t001; Vitvi08g01156_P001; Vitvi08g01156.
DR GeneID; 100248209; -.
DR Gramene; Vitvi08g01156_t001; Vitvi08g01156_P001; Vitvi08g01156.
DR KEGG; vvi:100248209; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_022641_0_0_1; -.
DR InParanoid; F6HQU9; -.
DR OrthoDB; 1206490at2759; -.
DR Proteomes; UP000009183; Chromosome 8.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR GO; GO:0006397; P:mRNA processing; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 7.
DR PANTHER; PTHR46598; BNAC05G43320D PROTEIN; 1.
DR PANTHER; PTHR46598:SF5; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN, CHLOROPLASTIC; 1.
DR Pfam; PF01535; PPR; 2.
DR Pfam; PF12854; PPR_1; 1.
DR Pfam; PF13041; PPR_2; 3.
DR PROSITE; PS51375; PPR; 9.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000009183};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 231..265
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 266..300
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 380..414
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 418..452
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 453..488
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 489..523
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 524..554
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 560..594
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 645..679
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 749 AA; 83515 MW; 9D36FACF47236FA3 CRC64;
MNTAKPPPPP SSTSSPFPIL QTLTPLHRVS PLPSSTIITT FTSKPPRQFV VLVQSTADHT
NPTSVSFITT TTATTPHHSL NQTLLTLLRQ RKTEEAWLTY VQCTQLPSPT CLSRLVSQLS
YQNTHQALTR AQSIIQRLRN ERQLHRLDAN SLGLLAVSAA KAGHTLYAAS LIKSMLRSGY
LPHVKAWSAV VSRLAASGDD GPLEALKLFD SVTRRIHRFT DATLVADSRP DTAAYNAVLN
ACANLGDTKR FLQVFEEMTQ LGAEPDVLTY NVMIKLCARV DRKDLLVFVL ERILDKGIQL
CMTTLHSLVA AYVGFGDLET AEKLVQAMRE GRQDLCKILR DVNSENPGNN EGYIFDKLLP
NSVERNNSEP PLLPKAYAPD SRIYTTLMKG YMKEGRVTDT VRMLEAMRHQ DDSTSQPDHV
TYTTVVSALV KAGSMDRARQ VLAEMTRIGV PANRVTYNIL LKGYCEQLQI DKAKELVREM
VDDEGIVPDV VSYNTLIDGC ILVDDSAGAL AYFNEMRARG IAPTKISYTT LMKAFALSGQ
PKLANKVFDE MLRDPRVKVD LVAWNMLVEA HCRLGLVEEA KKTVQRMREN GFYPNVATYG
SLANGIALAR KPGEALLLWN EVKERCVVKE EGEISKSSPP PLKPDEGLLD TLADICVRAA
FFRKALEIVA CMEENGIPPN KSKYTRIYVE MHSRMFTSKH ASKARQDRRS ERKRAAEAFK
FWLGLPNSYY GSEWRLEPID GDDYASDSV
//