ID F6HRE4_VITVI Unreviewed; 350 AA.
AC F6HRE4;
DT 27-JUL-2011, integrated into UniProtKB/TrEMBL.
DT 27-JUL-2011, sequence version 1.
DT 27-MAR-2024, entry version 78.
DE RecName: Full=Homeobox protein SBH1 {ECO:0008006|Google:ProtNLM};
GN OrderedLocusNames=VIT_10s0116g00190 {ECO:0000313|EMBL:CCB57252.1};
OS Vitis vinifera (Grape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; Vitales; Vitaceae; Viteae; Vitis.
OX NCBI_TaxID=29760 {ECO:0000313|EMBL:CCB57252.1, ECO:0000313|Proteomes:UP000009183};
RN [1] {ECO:0000313|Proteomes:UP000009183}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Pinot noir / PN40024 {ECO:0000313|Proteomes:UP000009183};
RX PubMed=17721507; DOI=10.1038/nature06148;
RG The French-Italian Public Consortium for Grapevine Genome Characterization.;
RA Jaillon O., Aury J.-M., Noel B., Policriti A., Clepet C., Casagrande A.,
RA Choisne N., Aubourg S., Vitulo N., Jubin C., Vezzi A., Legeai F.,
RA Hugueney P., Dasilva C., Horner D., Mica E., Jublot D., Poulain J.,
RA Bruyere C., Billault A., Segurens B., Gouyvenoux M., Ugarte E.,
RA Cattonaro F., Anthouard V., Vico V., Del Fabbro C., Alaux M.,
RA Di Gaspero G., Dumas V., Felice N., Paillard S., Juman I., Moroldo M.,
RA Scalabrin S., Canaguier A., Le Clainche I., Malacrida G., Durand E.,
RA Pesole G., Laucou V., Chatelet P., Merdinoglu D., Delledonne M.,
RA Pezzotti M., Lecharny A., Scarpelli C., Artiguenave F., Pe M.E., Valle G.,
RA Morgante M., Caboche M., Adam-Blondon A.-F., Weissenbach J., Quetier F.,
RA Wincker P.;
RT "The grapevine genome sequence suggests ancestral hexaploidization in major
RT angiosperm phyla.";
RL Nature 449:463-467(2007).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|PROSITE-ProRule:PRU00108}.
CC -!- SIMILARITY: Belongs to the TALE/KNOX homeobox family.
CC {ECO:0000256|PROSITE-ProRule:PRU00559}.
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DR EMBL; FN596012; CCB57252.1; -; Genomic_DNA.
DR AlphaFoldDB; F6HRE4; -.
DR SMR; F6HRE4; -.
DR STRING; 29760.F6HRE4; -.
DR PaxDb; 29760-VIT_10s0116g00190-t01; -.
DR EnsemblPlants; Vitvi10g00124_t001; Vitvi10g00124_P001; Vitvi10g00124.
DR Gramene; Vitvi10g00124_t001; Vitvi10g00124_P001; Vitvi10g00124.
DR eggNOG; KOG0773; Eukaryota.
DR HOGENOM; CLU_040111_0_0_1; -.
DR InParanoid; F6HRE4; -.
DR Proteomes; UP000009183; Chromosome 10, unordered.
DR ExpressionAtlas; F6HRE4; baseline and differential.
DR GO; GO:0005768; C:endosome; IEA:EnsemblPlants.
DR GO; GO:0015630; C:microtubule cytoskeleton; IEA:EnsemblPlants.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0005886; C:plasma membrane; IEA:EnsemblPlants.
DR GO; GO:0009506; C:plasmodesma; IEA:EnsemblPlants.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IBA:GO_Central.
DR GO; GO:0042803; F:protein homodimerization activity; IEA:EnsemblPlants.
DR GO; GO:0003723; F:RNA binding; IEA:EnsemblPlants.
DR GO; GO:0048440; P:carpel development; IEA:EnsemblPlants.
DR GO; GO:0010582; P:floral meristem determinacy; IEA:EnsemblPlants.
DR GO; GO:0009934; P:regulation of meristem structural organization; IEA:EnsemblPlants.
DR CDD; cd00086; homeodomain; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR InterPro; IPR005539; ELK_dom.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR017970; Homeobox_CS.
DR InterPro; IPR001356; Homeobox_dom.
DR InterPro; IPR008422; Homeobox_KN_domain.
DR InterPro; IPR005540; KNOX1.
DR InterPro; IPR005541; KNOX2.
DR PANTHER; PTHR11850:SF381; HOMEOBOX DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR11850; HOMEOBOX PROTEIN TRANSCRIPTION FACTORS; 1.
DR Pfam; PF03789; ELK; 1.
DR Pfam; PF05920; Homeobox_KN; 1.
DR Pfam; PF03790; KNOX1; 1.
DR Pfam; PF03791; KNOX2; 1.
DR SMART; SM01188; ELK; 1.
DR SMART; SM00389; HOX; 1.
DR SMART; SM01255; KNOX1; 1.
DR SMART; SM01256; KNOX2; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR PROSITE; PS51213; ELK; 1.
DR PROSITE; PS00027; HOMEOBOX_1; 1.
DR PROSITE; PS50071; HOMEOBOX_2; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|PROSITE-
KW ProRule:PRU00108};
KW Homeobox {ECO:0000256|ARBA:ARBA00023155, ECO:0000256|PROSITE-
KW ProRule:PRU00108};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PROSITE-
KW ProRule:PRU00108}; Reference proteome {ECO:0000313|Proteomes:UP000009183}.
FT DOMAIN 231..251
FT /note="ELK"
FT /evidence="ECO:0000259|PROSITE:PS51213"
FT DOMAIN 251..314
FT /note="Homeobox"
FT /evidence="ECO:0000259|PROSITE:PS50071"
FT DNA_BIND 252..315
FT /note="Homeobox; TALE-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00108"
FT REGION 197..218
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 350 AA; 39435 MW; BCDE647D045BBE1F CRC64;
MAFGDNSSNG LCPMMMMPLM TTSNPNAADA NTLFLPLPPN HNHDLNRNSS RGSSLILENH
NHNQHTTTTS TNNHHGSDPG CYFMETHGNN DGSTSSVKAK IMAHPHYHRL LAAYANCQKV
GAPPEVVARL EEACASEAAM VRTGTSCIGE DPALDQFMEA YCEMLTKYEQ ELSKPFKEAM
LFLSRVECQF KALTVSSSDS AGGEGLDRNG SSEEEVDVNN NFIDPQAEDR ELKGQLLRKY
SGYLSSLKQE FMKKRKKGKL PKEARQQLLD WWSRHYKWPY PSESQKLALA ESTGLDQKQI
NNWFINQRKR HWKPSEDMQF VVMDATHPGH YYMDNVLGNP FPMDLSPTLL
//
