ID   F6HX75_VITVI            Unreviewed;       872 AA.
AC   F6HX75;
DT   27-JUL-2011, integrated into UniProtKB/TrEMBL.
DT   27-JUL-2011, sequence version 1.
DT   27-MAR-2024, entry version 73.
DE   RecName: Full=DYW domain-containing protein {ECO:0000259|Pfam:PF14432};
GN   OrderedLocusNames=VIT_09s0002g05690 {ECO:0000313|EMBL:CCB59545.1};
OS   Vitis vinifera (Grape).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; Vitales; Vitaceae; Viteae; Vitis.
OX   NCBI_TaxID=29760 {ECO:0000313|EMBL:CCB59545.1, ECO:0000313|Proteomes:UP000009183};
RN   [1] {ECO:0000313|Proteomes:UP000009183}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Pinot noir / PN40024 {ECO:0000313|Proteomes:UP000009183};
RX   PubMed=17721507; DOI=10.1038/nature06148;
RG   The French-Italian Public Consortium for Grapevine Genome Characterization.;
RA   Jaillon O., Aury J.-M., Noel B., Policriti A., Clepet C., Casagrande A.,
RA   Choisne N., Aubourg S., Vitulo N., Jubin C., Vezzi A., Legeai F.,
RA   Hugueney P., Dasilva C., Horner D., Mica E., Jublot D., Poulain J.,
RA   Bruyere C., Billault A., Segurens B., Gouyvenoux M., Ugarte E.,
RA   Cattonaro F., Anthouard V., Vico V., Del Fabbro C., Alaux M.,
RA   Di Gaspero G., Dumas V., Felice N., Paillard S., Juman I., Moroldo M.,
RA   Scalabrin S., Canaguier A., Le Clainche I., Malacrida G., Durand E.,
RA   Pesole G., Laucou V., Chatelet P., Merdinoglu D., Delledonne M.,
RA   Pezzotti M., Lecharny A., Scarpelli C., Artiguenave F., Pe M.E., Valle G.,
RA   Morgante M., Caboche M., Adam-Blondon A.-F., Weissenbach J., Quetier F.,
RA   Wincker P.;
RT   "The grapevine genome sequence suggests ancestral hexaploidization in major
RT   angiosperm phyla.";
RL   Nature 449:463-467(2007).
CC   -!- SIMILARITY: Belongs to the PPR family. PCMP-H subfamily.
CC       {ECO:0000256|ARBA:ARBA00006643}.
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DR   EMBL; FN596494; CCB59545.1; -; Genomic_DNA.
DR   RefSeq; XP_002285225.2; XM_002285189.4.
DR   AlphaFoldDB; F6HX75; -.
DR   STRING; 29760.F6HX75; -.
DR   PaxDb; 29760-VIT_09s0002g05690-t01; -.
DR   EnsemblPlants; Vitvi09g00487_t001; Vitvi09g00487_P001; Vitvi09g00487.
DR   GeneID; 100263494; -.
DR   Gramene; Vitvi09g00487_t001; Vitvi09g00487_P001; Vitvi09g00487.
DR   KEGG; vvi:100263494; -.
DR   eggNOG; KOG4197; Eukaryota.
DR   HOGENOM; CLU_002706_15_1_1; -.
DR   InParanoid; F6HX75; -.
DR   OrthoDB; 1200295at2759; -.
DR   Proteomes; UP000009183; Chromosome 9.
DR   ExpressionAtlas; F6HX75; baseline.
DR   GO; GO:0043231; C:intracellular membrane-bounded organelle; IBA:GO_Central.
DR   GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   GO; GO:0009451; P:RNA modification; IBA:GO_Central.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 5.
DR   InterPro; IPR032867; DYW_dom.
DR   InterPro; IPR046848; E_motif.
DR   InterPro; IPR002885; Pentatricopeptide_rpt.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   NCBIfam; TIGR00756; PPR; 6.
DR   PANTHER; PTHR47928:SF204; PPR_LONG DOMAIN-CONTAINING PROTEIN; 1.
DR   PANTHER; PTHR47928; REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED; 1.
DR   Pfam; PF14432; DYW_deaminase; 1.
DR   Pfam; PF20431; E_motif; 1.
DR   Pfam; PF01535; PPR; 5.
DR   Pfam; PF13041; PPR_2; 3.
DR   PROSITE; PS51375; PPR; 5.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000009183};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT   REPEAT          159..193
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          260..294
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          361..395
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          561..595
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          596..626
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   DOMAIN          789..865
FT                   /note="DYW"
FT                   /evidence="ECO:0000259|Pfam:PF14432"
SQ   SEQUENCE   872 AA;  98201 MW;  593D562B4468666B CRC64;
     MAVSAKIPAI HLQTNLPNPH HSKTHKPKPL NFSRNIQTRQ ISLRKHHEIS VLNPSSITAQ
     NPNSLILELC LKGDLEKALI HLDSMQELQV SVEEETYIAL LRLCEWKRAA SEGSRVHSYV
     SKTVTRLGVR LGNALLSMFV RFGDLVEAWY VFGKMAERDL FSWNVLVGGY AKAGYFDEAL
     NLYHRMLWVG IRPDVYTFPC VLRTCGGLPD LARGREVHLH VIRYGFESDV DVVNALITMY
     VKCGDIFSAR LVFDRMPRRD RISWNAMISG YFENDVCLEG LRLFFMMREF FVDPDLMTMT
     SVISACEALG DERLGREVHG YVIKTGFVAE VSVNNSLIQM HSSVGCWDEA EMVFSKMEFK
     DLVSWTAMIS GYEKNGLPEK AVETYTIMEH EGVVPDEITI ASVLSACAGL GLLDKGIMLH
     EFADRTGLTS YVIVANSLID MYSKCRCIDK ALEVFHRIPN KNVISWTSII LGLRLNYRSF
     EALFFFQQMI LSLKPNSVTL VSVLSACARI GALSCGKEIH AHALRTGLGF DGFLPNALLD
     MYVRCGRMEP AWNQFNSCEK DVASWNILLT GYAQQGKGGL AVELFHKMIE SDVNPDEITF
     TSLLCACSRS GMVTDGLEYF ESMEHKFHIA PNLKHYASVV DLLGRAGRLE DAYEFIKKMP
     IDPDPAIWGA LLNACRIYQN VELGELAAQH IFEMDTKSVG YYILLCNLYA DSGKWDEVAR
     VRKIMRENRL TVDPGCSWVE VAGQVHAFLT GDDFHPQIKE INAVLEGFYE KMEATGLSMS
     KDSRRDDIDA SKAEIFCGHS ERLAIAFGLI NTVPGTPIWV TKNLYMCENC HNTVKFISKV
     VRRGISVRDT EQFHHFKDGV CSCGDEGYWG KT
//