ID F6ZT40_CIOIN Unreviewed; 1304 AA.
AC F6ZT40;
DT 27-JUL-2011, integrated into UniProtKB/TrEMBL.
DT 18-APR-2012, sequence version 2.
DT 24-JAN-2024, entry version 67.
DE RecName: Full=RanBP2-type domain-containing protein {ECO:0000259|PROSITE:PS50199};
GN Name=zf(rbz)-2 {ECO:0000313|Ensembl:ENSCINP00000019841.3};
OS Ciona intestinalis (Transparent sea squirt) (Ascidia intestinalis).
OC Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Phlebobranchia;
OC Cionidae; Ciona.
OX NCBI_TaxID=7719 {ECO:0000313|Ensembl:ENSCINP00000019841.3, ECO:0000313|Proteomes:UP000008144};
RN [1] {ECO:0000313|Proteomes:UP000008144}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=12481130; DOI=10.1126/science.1080049;
RA Dehal P., Satou Y., Campbell R.K., Chapman J., Degnan B., De Tomaso A.,
RA Davidson B., Di Gregorio A., Gelpke M., Goodstein D.M., Harafuji N.,
RA Hastings K.E., Ho I., Hotta K., Huang W., Kawashima T., Lemaire P.,
RA Martinez D., Meinertzhagen I.A., Necula S., Nonaka M., Putnam N., Rash S.,
RA Saiga H., Satake M., Terry A., Yamada L., Wang H.G., Awazu S., Azumi K.,
RA Boore J., Branno M., Chin-Bow S., DeSantis R., Doyle S., Francino P.,
RA Keys D.N., Haga S., Hayashi H., Hino K., Imai K.S., Inaba K., Kano S.,
RA Kobayashi K., Kobayashi M., Lee B.I., Makabe K.W., Manohar C., Matassi G.,
RA Medina M., Mochizuki Y., Mount S., Morishita T., Miura S., Nakayama A.,
RA Nishizaka S., Nomoto H., Ohta F., Oishi K., Rigoutsos I., Sano M.,
RA Sasaki A., Sasakura Y., Shoguchi E., Shin-i T., Spagnuolo A., Stainier D.,
RA Suzuki M.M., Tassy O., Takatori N., Tokuoka M., Yagi K., Yoshizaki F.,
RA Wada S., Zhang C., Hyatt P.D., Larimer F., Detter C., Doggett N.,
RA Glavina T., Hawkins T., Richardson P., Lucas S., Kohara Y., Levine M.,
RA Satoh N., Rokhsar D.S.;
RT "The draft genome of Ciona intestinalis: insights into chordate and
RT vertebrate origins.";
RL Science 298:2157-2167(2002).
RN [2] {ECO:0000313|Ensembl:ENSCINP00000019841.3}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (JUL-2023) to UniProtKB.
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DR STRING; 7719.ENSCINP00000019841; -.
DR Ensembl; ENSCINT00000019841.3; ENSCINP00000019841.3; ENSCING00000009766.3.
DR GeneTree; ENSGT00940000153253; -.
DR HOGENOM; CLU_004629_1_0_1; -.
DR InParanoid; F6ZT40; -.
DR OMA; SASEWEC; -.
DR TreeFam; TF323517; -.
DR Proteomes; UP000008144; Unassembled WGS sequence.
DR GO; GO:0005643; C:nuclear pore; IBA:GO_Central.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0008139; F:nuclear localization sequence binding; IBA:GO_Central.
DR GO; GO:0017056; F:structural constituent of nuclear pore; IBA:GO_Central.
DR GO; GO:0006606; P:protein import into nucleus; IBA:GO_Central.
DR GO; GO:0006405; P:RNA export from nucleus; IBA:GO_Central.
DR Gene3D; 4.10.1060.10; Zinc finger, RanBP2-type; 4.
DR InterPro; IPR026054; Nucleoporin.
DR InterPro; IPR001876; Znf_RanBP2.
DR InterPro; IPR036443; Znf_RanBP2_sf.
DR PANTHER; PTHR23193; NUCLEAR PORE COMPLEX PROTEIN NUP; 1.
DR PANTHER; PTHR23193:SF23; NUCLEAR PORE COMPLEX PROTEIN NUP153; 1.
DR Pfam; PF00641; zf-RanBP; 4.
DR SMART; SM00547; ZnF_RBZ; 4.
DR SUPFAM; SSF90209; Ran binding protein zinc finger-like; 4.
DR PROSITE; PS01358; ZF_RANBP2_1; 4.
DR PROSITE; PS50199; ZF_RANBP2_2; 4.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000008144};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00322}.
FT DOMAIN 549..578
FT /note="RanBP2-type"
FT /evidence="ECO:0000259|PROSITE:PS50199"
FT DOMAIN 602..633
FT /note="RanBP2-type"
FT /evidence="ECO:0000259|PROSITE:PS50199"
FT DOMAIN 695..724
FT /note="RanBP2-type"
FT /evidence="ECO:0000259|PROSITE:PS50199"
FT DOMAIN 742..771
FT /note="RanBP2-type"
FT /evidence="ECO:0000259|PROSITE:PS50199"
FT REGION 1..32
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 51..175
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 340..492
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 512..545
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 792..865
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 901..937
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 956..998
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1017..1114
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1221..1304
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 13..27
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 51..100
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 103..121
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 122..175
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 401..477
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 792..826
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 845..865
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1017..1052
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1093..1114
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1221..1293
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1304 AA; 138348 MW; 30E85E79278BB34D CRC64;
MENQAEKGGG KIKKRSSKTR KPYSRPPKKS IFTRVTDSVK NLFSSHWFTQ SNDAAETSVD
ADTEDQPSTS RFESPLACPS LSTKRKLQEN IPSPVQKSLN QDEFKKVFGK SQFKEKSSPF
SLERAETSSV ASSSGCSSQP GSRSNLNEKP KAPSLWSSLG GSTEQPTERN GPVFNSSLLA
SDVGLTPSAK QSSFYSGRVS YGGAMNQSRN SIYQPSPYKI PQATKVQVRS KSRANESSLN
VTTRGAPMSS TARKILTTLE KMSTPLNDAK RIVTHQAPIN RSMLSRQSMR RKTIGPSILS
SNKPPTTGMV SMAEATKRVR SPNIPLSKES ATWSIAKRVA TSQPPPNTDI PHGPPAPIAS
LSSSAGMRSG GKMVRKTTSH YSTKKQEEED DLPPLPLPSV PLTLSSNLPS FNFGRPGSTS
TPAVSRPPQQ RSVVPKQPMY QFASPTAQAT LSTTTPTSDG PTFRFSSPNT SVNEGKKMNE
GTPPVVPAKP SPLLKKGGVM DILGNSTPLK PTTKSCEACE TPKPGPKPIT AKPLAQTNTS
GGFMAPKMTT DKWECDTCMI MNANSRLSCE ACQSPKPGSK SEFGAKSAAQ TSKVTFSFGA
PKTGEKKWEC DGCMLMNDPK FDKCPACTTP RPGASANTLT QPSKGFSFGA PAATAVTTVA
CTAPKPGSTT STKQVSSEKT SGFKFGGPVS QSFPKSKTWE CMVCMLHNTE DKQKCAACET
TRPGAIIISP IKPNDVKASD KKLPSWECDV CMVQNKGDCN TCIACTNPKP GQTSSAAKAT
FKFGFTSAPL TETSKDTSTT KTQFKFGVPT NSTPAMTKSD NKPSIQLPKS GGFKFGVPAA
KPSEEKSAES ADKTVSSKRK SDDTKCEEVA AVTSATTPTI SGSNFGIIAK PLTTAKTPIF
GANQEKPKVP GFGSNQEKPK VPSFGSNQET PKVPMFGAKP DQQKAQVFGL NQEKTKLPNF
DSNQEKPKIP SFGSSQEKPK ASMFGSNQTT TFGQPASLPT QIKVAEPVTT VVAENKATAP
TFSFGNKNLD FGANQSKTTE VPKPSPPSFS FGSKPANPVE PKAAPFVFGA AAPKPDTSQL
ENKPAAPTFA FGSSSAAPAS VPQQQKPKTG FNFGQSTAAA NTTALPTFQF GASQSKPTNM
FQQKENNFGS NSQAAPAFGS TMSKPAVFQF GAKENVVEQK PTITPAFQFG ATAPPIEKPT
TFQFAQTAPT PTPSTFVFGN QQNTPSAGFQ FGAQSSSGMF ANTQPVQPPA PQNTSFAFGA
SQPPQNSGNT MFSIGTASSK PAGRSSTPVG QRTYKKANRR LKKP
//