ID F7ABX7_CALJA Unreviewed; 616 AA.
AC F7ABX7; F7IK65;
DT 27-JUL-2011, integrated into UniProtKB/TrEMBL.
DT 25-MAY-2022, sequence version 3.
DT 24-JAN-2024, entry version 70.
DE RecName: Full=Nuclear RNA export factor 1 {ECO:0000256|ARBA:ARBA00040973};
GN Name=NXF1 {ECO:0000313|Ensembl:ENSCJAP00000046013.3};
OS Callithrix jacchus (White-tufted-ear marmoset).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae;
OC Callitrichinae; Callithrix; Callithrix.
OX NCBI_TaxID=9483 {ECO:0000313|Ensembl:ENSCJAP00000046013.3, ECO:0000313|Proteomes:UP000008225};
RN [1] {ECO:0000313|Ensembl:ENSCJAP00000046013.3}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA Warren W., Ye L., Minx P., Worley K., Gibbs R., Wilson R.K.;
RL Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSCJAP00000046013.3}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (JUL-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
CC Nucleus speckle {ECO:0000256|ARBA:ARBA00004324}. Nucleus, nucleoplasm
CC {ECO:0000256|ARBA:ARBA00004642}.
CC -!- SIMILARITY: Belongs to the NXF family. {ECO:0000256|ARBA:ARBA00009285}.
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DR AlphaFoldDB; F7ABX7; -.
DR STRING; 9483.ENSCJAP00000046013; -.
DR Ensembl; ENSCJAT00000060900.4; ENSCJAP00000046013.3; ENSCJAG00000018635.5.
DR eggNOG; KOG3763; Eukaryota.
DR GeneTree; ENSGT00390000007539; -.
DR InParanoid; F7ABX7; -.
DR OrthoDB; 21687at2759; -.
DR TreeFam; TF314566; -.
DR Proteomes; UP000008225; Chromosome 11.
DR Bgee; ENSCJAG00000018635; Expressed in ovary and 6 other cell types or tissues.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006406; P:mRNA export from nucleus; IEA:InterPro.
DR CDD; cd00780; NTF2; 1.
DR CDD; cd14342; UBA_TAP-C; 1.
DR Gene3D; 3.10.450.50; -; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR Gene3D; 1.10.8.10; DNA helicase RuvA subunit, C-terminal domain; 1.
DR Gene3D; 3.80.10.10; Ribonuclease Inhibitor; 1.
DR InterPro; IPR001611; Leu-rich_rpt.
DR InterPro; IPR032675; LRR_dom_sf.
DR InterPro; IPR032710; NTF2-like_dom_sf.
DR InterPro; IPR002075; NTF2_dom.
DR InterPro; IPR018222; Nuclear_transport_factor_2_euk.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR030217; NXF_fam.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR005637; TAP_C_dom.
DR InterPro; IPR015245; Tap_RNA-bd.
DR InterPro; IPR009060; UBA-like_sf.
DR PANTHER; PTHR10662; NUCLEAR RNA EXPORT FACTOR; 1.
DR PANTHER; PTHR10662:SF27; NUCLEAR RNA EXPORT FACTOR 1; 1.
DR Pfam; PF02136; NTF2; 1.
DR Pfam; PF09162; Tap-RNA_bind; 1.
DR Pfam; PF03943; TAP_C; 1.
DR SMART; SM00804; TAP_C; 1.
DR SUPFAM; SSF52058; L domain-like; 1.
DR SUPFAM; SSF54427; NTF2-like; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR SUPFAM; SSF46934; UBA-like; 1.
DR PROSITE; PS51450; LRR; 2.
DR PROSITE; PS50177; NTF2_DOMAIN; 1.
DR PROSITE; PS51281; TAP_C; 1.
PE 3: Inferred from homology;
KW Acetylation {ECO:0000256|ARBA:ARBA00022990};
KW Leucine-rich repeat {ECO:0000256|ARBA:ARBA00022614};
KW Methylation {ECO:0000256|ARBA:ARBA00022481};
KW mRNA transport {ECO:0000256|ARBA:ARBA00022816};
KW Nitration {ECO:0000256|ARBA:ARBA00023074};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000008225};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transport {ECO:0000256|ARBA:ARBA00022448}.
FT DOMAIN 383..533
FT /note="NTF2"
FT /evidence="ECO:0000259|PROSITE:PS50177"
FT DOMAIN 562..616
FT /note="TAP-C"
FT /evidence="ECO:0000259|PROSITE:PS51281"
FT REGION 1..111
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..18
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 78..101
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 616 AA; 69988 MW; F6AC774B76681A4F CRC64;
LAKEMKKHDD ERVNFPQRRK KGRGPFRWKY GEGNRRSGRG GSSIRSSRLE EDDGDVAMSD
AQDGPRVRYN PYTTRPNRRG DTWHDRDRIH VTVRRDRAPS ERGGAGTSQD GTSKNWFKIT
IPYGKKYDKA WLLSMIQSKC SVPFTPIEFH YENTRAQFFV EDASTASALK AINYKILDRE
NRRISIIINS SAPPPTILNE LKPEQVEQLK LIMSKRYDGS QQALDLKGLR SDPDLVAQNI
DVVLNRRSCM AATLRIIEEN IPELLSLNLS NNRLYRLDDM SSIVQKAPNL KILNLSGNEL
KSERELDKIK GLKLEELWLD GNSLCDTFRD QSTYISAIRE RFPKLLRLDG HELPPPIAFD
IEPPTTLPPC KGSYFGTENL KSLVLHFLQQ YYAIYDSGDR QGLLDAYHDG ACCSLSIPFI
PQNPARSNLA EYFKDSRNVK KLKDPTLRFR LLKHTRLNVV AFLNELPKTQ HDVNSFVVDI
SAQTSTLLCF SVNGVFKEVD GKSRDSLRAF TRTFIAVPAT NSGLCIVNDE LFVRNASSEE
IQRAFAMPAP TPSSSPVPTL SPEQQEMLQA FSTQSGMNLE WSQKCLQDNN WDYTRSAQAF
THLKAKGEIP EVAFMK
//