ID F7IG39_CALJA Unreviewed; 191 AA.
AC F7IG39;
DT 27-JUL-2011, integrated into UniProtKB/TrEMBL.
DT 27-JUL-2011, sequence version 1.
DT 27-MAR-2024, entry version 84.
DE SubName: Full=Chromobox 5 {ECO:0000313|Ensembl:ENSCJAP00000035012.1};
DE SubName: Full=Chromobox protein homolog 5 {ECO:0000313|EMBL:JAB01790.1};
GN Name=CBX5 {ECO:0000313|EMBL:JAB01790.1,
GN ECO:0000313|Ensembl:ENSCJAP00000035012.1};
OS Callithrix jacchus (White-tufted-ear marmoset).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae;
OC Callitrichinae; Callithrix; Callithrix.
OX NCBI_TaxID=9483 {ECO:0000313|Ensembl:ENSCJAP00000035012.1, ECO:0000313|Proteomes:UP000008225};
RN [1] {ECO:0000313|Ensembl:ENSCJAP00000035012.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA Warren W., Ye L., Minx P., Worley K., Gibbs R., Wilson R.K.;
RL Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:JAB01790.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Bladder {ECO:0000313|EMBL:JAB01790.1}, Cerebellum
RC {ECO:0000313|EMBL:JAB50978.1}, Cerebral cortex
RC {ECO:0000313|EMBL:JAB33832.1}, Hippocampus
RC {ECO:0000313|EMBL:JAB15283.1}, and Skeletal muscle
RC {ECO:0000313|EMBL:JAB35471.1};
RX PubMed=25243066; DOI=10.1186/2047-217X-3-14;
RA Maudhoo M.D., Ren D., Gradnigo J.S., Gibbs R.M., Lubker A.C.,
RA Moriyama E.N., French J.A., Norgren R.B.Jr.;
RT "De novo assembly of the common marmoset transcriptome from NextGen mRNA
RT sequences.";
RL Gigascience 3:14-14(2014).
RN [3] {ECO:0000313|Ensembl:ENSCJAP00000035012.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; GAMT01010071; JAB01790.1; -; mRNA.
DR EMBL; GAMS01007853; JAB15283.1; -; mRNA.
DR EMBL; GAMS01007852; JAB15284.1; -; mRNA.
DR EMBL; GAMS01007851; JAB15285.1; -; mRNA.
DR EMBL; GAMR01000100; JAB33832.1; -; mRNA.
DR EMBL; GAMR01000092; JAB33840.1; -; mRNA.
DR EMBL; GAMQ01006380; JAB35471.1; -; mRNA.
DR EMBL; GAMP01001777; JAB50978.1; -; mRNA.
DR EMBL; GAMP01001776; JAB50979.1; -; mRNA.
DR RefSeq; XP_002752593.1; XM_002752547.4.
DR RefSeq; XP_002752595.1; XM_002752549.4.
DR RefSeq; XP_009002148.1; XM_009003900.2.
DR STRING; 9483.ENSCJAP00000035012; -.
DR Ensembl; ENSCJAT00000036969.4; ENSCJAP00000035012.1; ENSCJAG00000018847.4.
DR GeneID; 100415136; -.
DR KEGG; cjc:100415136; -.
DR CTD; 23468; -.
DR eggNOG; KOG1911; Eukaryota.
DR GeneTree; ENSGT00940000158801; -.
DR HOGENOM; CLU_045874_1_0_1; -.
DR OrthoDB; 75895at2759; -.
DR TreeFam; TF350503; -.
DR Proteomes; UP000008225; Chromosome 9.
DR Bgee; ENSCJAG00000018847; Expressed in ovary and 6 other cell types or tissues.
DR GO; GO:0000792; C:heterochromatin; IEA:UniProt.
DR GO; GO:0005634; C:nucleus; IEA:InterPro.
DR CDD; cd18651; CD_HP1alpha_Cbx5; 1.
DR CDD; cd18655; CSD_HP1alpha_Cbx5; 1.
DR Gene3D; 2.40.50.40; -; 2.
DR InterPro; IPR016197; Chromo-like_dom_sf.
DR InterPro; IPR000953; Chromo/chromo_shadow_dom.
DR InterPro; IPR017984; Chromo_dom_subgr.
DR InterPro; IPR023780; Chromo_domain.
DR InterPro; IPR008251; Chromo_shadow_dom.
DR InterPro; IPR023779; Chromodomain_CS.
DR PANTHER; PTHR22812; CHROMOBOX PROTEIN; 1.
DR PANTHER; PTHR22812:SF85; CHROMOBOX PROTEIN HOMOLOG 5; 1.
DR Pfam; PF00385; Chromo; 1.
DR Pfam; PF01393; Chromo_shadow; 1.
DR PRINTS; PR00504; CHROMODOMAIN.
DR SMART; SM00298; CHROMO; 2.
DR SMART; SM00300; ChSh; 1.
DR SUPFAM; SSF54160; Chromo domain-like; 2.
DR PROSITE; PS00598; CHROMO_1; 1.
DR PROSITE; PS50013; CHROMO_2; 2.
PE 2: Evidence at transcript level;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000008225}.
FT DOMAIN 20..78
FT /note="Chromo"
FT /evidence="ECO:0000259|PROSITE:PS50013"
FT DOMAIN 121..179
FT /note="Chromo"
FT /evidence="ECO:0000259|PROSITE:PS50013"
FT REGION 70..117
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 191 AA; 22225 MW; 16FFC476367093B1 CRC64;
MGKKTKRTAD SSSSEDEEEY VVEKVLDRRV VKGQVEYLLK WKGFSEEHNT WEPEKNLDCP
ELISEFMKKY KKMKEGENNK PREKSESNKR KSNFSNSADD IKSKKKREQS NDIARGFERG
LEPEKIIGAT DSCGDLMFLM KWKDTDEADL VLAKEANVKC PQIVIAFYEE RLTWHAYPED
AENKEKETAK S
//
