ID F7XC83_SINMM Unreviewed; 309 AA.
AC F7XC83;
DT 21-SEP-2011, integrated into UniProtKB/TrEMBL.
DT 21-SEP-2011, sequence version 1.
DT 27-MAR-2024, entry version 60.
DE SubName: Full=NylB upstream ORF {ECO:0000313|EMBL:AEH81374.1};
GN OrderedLocusNames=SM11_pC0301 {ECO:0000313|EMBL:AEH81374.1};
OS Sinorhizobium meliloti (strain SM11).
OG Plasmid pSmeSM11c {ECO:0000313|EMBL:AEH81374.1,
OG ECO:0000313|Proteomes:UP000009045}.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
OC Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.
OX NCBI_TaxID=707241 {ECO:0000313|EMBL:AEH81374.1, ECO:0000313|Proteomes:UP000009045};
RN [1] {ECO:0000313|EMBL:AEH81374.1, ECO:0000313|Proteomes:UP000009045}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SM11 {ECO:0000313|EMBL:AEH81374.1,
RC ECO:0000313|Proteomes:UP000009045};
RC PLASMID=pSmeSM11c {ECO:0000313|Proteomes:UP000009045};
RX PubMed=21396969; DOI=10.1016/j.jbiotec.2010.12.018;
RA Schneiker-Bekel S., Wibberg D., Bekel T., Blom J., Linke B., Neuweger H.,
RA Stiens M., Vorholter F.J., Weidner S., Goesmann A., Puhler A., Schluter A.;
RT "The complete genome sequence of the dominant Sinorhizobium meliloti field
RT isolate SM11 extends the S. meliloti pan-genome.";
RL J. Biotechnol. 155:20-33(2011).
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DR EMBL; CP001831; AEH81374.1; -; Genomic_DNA.
DR RefSeq; WP_014531123.1; NZ_JAJJBH010000005.1.
DR AlphaFoldDB; F7XC83; -.
DR KEGG; smx:SM11_pC0301; -.
DR PATRIC; fig|707241.3.peg.4289; -.
DR HOGENOM; CLU_055769_1_2_5; -.
DR Proteomes; UP000009045; Plasmid pSmeSM11c.
DR GO; GO:0097367; F:carbohydrate derivative binding; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:1901135; P:carbohydrate derivative metabolic process; IEA:InterPro.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR000281; HTH_RpiR.
DR InterPro; IPR047640; RpiR-like.
DR InterPro; IPR001347; SIS_dom.
DR InterPro; IPR046348; SIS_dom_sf.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR PANTHER; PTHR30514; GLUCOKINASE; 1.
DR PANTHER; PTHR30514:SF18; RPIR-FAMILY TRANSCRIPTIONAL REGULATOR; 1.
DR Pfam; PF01418; HTH_6; 1.
DR Pfam; PF01380; SIS; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF53697; SIS domain; 1.
DR PROSITE; PS51071; HTH_RPIR; 1.
PE 4: Predicted;
KW Plasmid {ECO:0000313|EMBL:AEH81374.1}.
FT DOMAIN 20..96
FT /note="HTH rpiR-type"
FT /evidence="ECO:0000259|PROSITE:PS51071"
SQ SEQUENCE 309 AA; 34437 MW; AC5196C34A141275 CRC64;
MVKARSGTDS NGSSDVEQKI DIEAILRDRM SGFSPSEQTL AAYILDNIQI LPFETGSSIA
ETVGVSEMTV TRFVRGLGFE NLRDLKKRLR FAVAEKDSEV DDYMSRFQMR EGRQQMLQES
LRLELDAIVK AYALTTTDVW DEAASLLVKA RTIYVVGFQA SKGLAMDFAS RLLWARSNVI
FIDNASGTFG EIINADPKQS AVVLVDTASY ATRGIKLVEK LKSMDMPLVI VTDKFSHWAF
AYTRFVFEAH THVKTFWDST ASLSVVLNLL IDAVATKLGP KAKRNFAMMS DMGTLFGEFV
GGSYLRRND
//
