ID F9D700_PREDD Unreviewed; 1726 AA.
AC F9D700;
DT 19-OCT-2011, integrated into UniProtKB/TrEMBL.
DT 19-OCT-2011, sequence version 1.
DT 27-MAR-2024, entry version 60.
DE SubName: Full=DEAD/DEAH box helicase domain protein {ECO:0000313|EMBL:EGQ11869.1};
DE SubName: Full=Helicase family protein with metal-binding cysteine cluster {ECO:0000313|EMBL:AGB29689.1};
GN OrderedLocusNames=Prede_2439 {ECO:0000313|EMBL:AGB29689.1};
GN ORFNames=HMPREF9136_2628 {ECO:0000313|EMBL:EGQ11869.1};
OS Prevotella dentalis (strain ATCC 49559 / DSM 3688 / JCM 13448 / NCTC 12043
OS / ES 2772) (Mitsuokella dentalis).
OC Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Prevotellaceae;
OC Prevotella.
OX NCBI_TaxID=908937 {ECO:0000313|EMBL:EGQ11869.1, ECO:0000313|Proteomes:UP000007820};
RN [1] {ECO:0000313|EMBL:EGQ11869.1, ECO:0000313|Proteomes:UP000007820}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 3688 {ECO:0000313|EMBL:EGQ11869.1,
RC ECO:0000313|Proteomes:UP000007820};
RA Muzny D., Qin X., Deng J., Jiang H., Liu Y., Qu J., Song X.-Z., Zhang L.,
RA Thornton R., Coyle M., Francisco L., Jackson L., Javaid M., Korchina V.,
RA Kovar C., Mata R., Mathew T., Ngo R., Nguyen L., Nguyen N., Okwuonu G.,
RA Ongeri F., Pham C., Simmons D., Wilczek-Boney K., Hale W., Jakkamsetti A.,
RA Pham P., Ruth R., San Lucas F., Warren J., Zhang J., Zhao Z., Zhou C.,
RA Zhu D., Lee S., Bess C., Blankenburg K., Forbes L., Fu Q., Gubbala S.,
RA Hirani K., Jayaseelan J.C., Lara F., Munidasa M., Palculict T., Patil S.,
RA Pu L.-L., Saada N., Tang L., Weissenberger G., Zhu Y., Hemphill L.,
RA Shang Y., Youmans B., Ayvaz T., Ross M., Santibanez J., Aqrawi P.,
RA Gross S., Joshi V., Fowler G., Nazareth L., Reid J., Worley K.,
RA Petrosino J., Highlander S., Gibbs R.;
RL Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:AGB29689.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=DSM 3688 {ECO:0000313|EMBL:AGB29689.1};
RG US DOE Joint Genome Institute (JGI-PGF);
RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA Bruce D., Goodwin L., Pitluck S., Peters L., Mikhailova N., Chertkov O.,
RA Kyrpides N., Mavromatis K., Ivanova N., Brettin T., Detter J.C., Han C.,
RA Larimer F., Land M., Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P.,
RA Woyke T., Wu D., Gronow S., Wellnitz S., Brambilla E., Klenk H.-P.,
RA Eisen J.A.;
RT "Complete sequence of chromosome 2 of Prevotella dentalis DSM 3688.";
RL Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|Proteomes:UP000010862}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 49559 / DSM 3688 / JCM 13448 / NCTC 12043 / ES 2772
RC {ECO:0000313|Proteomes:UP000010862};
RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA Bruce D., Goodwin L., Pitluck S., Peters L., Mikhailova N., Chertkov O.,
RA Kyrpides N., Mavromatis K., Ivanova N., Brettin T., Detter J.C., Han C.,
RA Larimer F., Land M., Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P.,
RA Woyke T., Wu D., Gronow S., Wellnitz S., Brambilla E., Klenk H.-P.,
RA Eisen J.A.;
RT "Complete sequence of chromosome 2 of Prevotella dentalis DSM 3688.";
RL Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CP003369; AGB29689.1; -; Genomic_DNA.
DR EMBL; AFPW01000048; EGQ11869.1; -; Genomic_DNA.
DR RefSeq; WP_005847992.1; NZ_GL982492.1.
DR STRING; 908937.Prede_2439; -.
DR KEGG; pdt:Prede_2439; -.
DR PATRIC; fig|908937.9.peg.2571; -.
DR eggNOG; COG1201; Bacteria.
DR eggNOG; COG1205; Bacteria.
DR HOGENOM; CLU_001338_1_1_10; -.
DR OrthoDB; 9815222at2; -.
DR Proteomes; UP000007820; Unassembled WGS sequence.
DR Proteomes; UP000010862; Chromosome 2.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR Gene3D; 3.40.960.10; VSR Endonuclease; 1.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR PANTHER; PTHR47957; ATP-DEPENDENT HELICASE HRQ1; 1.
DR PANTHER; PTHR47957:SF3; ATP-DEPENDENT HELICASE HRQ1; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Helicase {ECO:0000313|EMBL:EGQ11869.1};
KW Hydrolase {ECO:0000313|EMBL:EGQ11869.1};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000010862}.
FT DOMAIN 90..282
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 920..1064
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
SQ SEQUENCE 1726 AA; 199801 MW; 7706ED9026ED3EB9 CRC64;
MDIISQYNQL KDSYKSYVSS FVTIKDDRIK ETVSAALKDE TLWPEALVQF NPNFAQGKSV
EEMIAVGSPI HTDLSMFFEN KFYKHQQDAI ELGCRDREFI VTSGTGSGKS RTFMATIFNY
LLFHREECQD KTIAIIVYPM NALINSQSEE LQRYKEEYER KKGENCPFTF GKYTGQEGRQ
ERERMQQTPP NIILTNYMML ELLMTRAGEE QPLRGCFLQN LHYLVFDELH TYRGMQGSDV
SLLIRRIKAQ AQGHVLCFGT SATLVADDKI SYKEQKEKVA EVASCIFGSS YVAEQIIDET
LKAGLNYPEV TKQEVMAAVN APVPANAGAD DIRIHPTTNW IEQNIALRYD AKEKKIFRGK
PLSIEEMANK LYEYVDRSIT KEDCTRHLIE VLNWCNRVNV EQHTNLLPYK IHQFIPQSGN
VYATIGMPSN RYVTVEEKLY CEELSDGDIK VNYFPIVFSR HTGHEFYCVK LNANGTFVPR
SFDNRNEEKE DSANTTDGYI ILPHEDEKAD RYLLSEDSEE IPEDWYKVDR KGRRHLKKTY
QERLPRLIYV TYTGKYADNS SAFANAIEAI YVPYPLKYDP TAKVVYRGSS KEWSKLAKIG
SEGRSTATTV LSYENIIEMQ ESGVPSSDRK IMTFVDARQD AALQAGHFND FIRIGKIRSA
IWHAVYESNS PIDSEKIARL VFQNLHLQFN EFSKRKDLRG GRAHDVEEVM ERYLSTIIYD
DLAGNWQVNM PNLEDCALLR INYKYLHDEI FGNAGRDRLY DIPELDGLTD EAKETFIIQI
LDYFRHKLCM HSAERTETAV RDTIKAVRDD LVDPWTLDDN DTIVAASSLM LVKPRSRRKT
FNIEVAGFHS KFATFISDFL INNGGTASIS NADEYIDYMA RLFQGLGNYI IERDGTYQLD
YRSILWEKGD EENVRTDQIK VRAIGEEIKY KPNAYFQNFY KHIPLKEVVL EAKDHTGQVP
KIEREEREKQ FRNGVFPVLY CTPTMELGID IKDLSIVGMR NVPPTPANYT QRAGRAGRSG
QAALIYTYCR PRNSHENYYL NHPEKMVNGE VKAPRMELVN EELFTTHLHS TILSLCPIQQ
LSEGIASLVD YSNSNNITLK PEVCYCLRLS SELKGKIKNV FKRVLADSFL SMKLDEDQPY
WFTDRWMDDI LNCYEKDFDK ALDRWRNLYK IAQQQIEEAQ IVIRNNIYGD NSKEKKDALI
KEKRGTELRD MLLGQNQGMN AEENEFYPYR YFASEGFLPG YNFTKLPQRA LLQYKSDKVE
YLSRSRRLAL SEFGPQNIIY NNGGKFRVTR MMLTGDVLEH KFFYNPNTGT IYKDQDNAAY
HTDIITGEAL DGVSKLIPGM CIQSQDMVAE EKEKITCQEE ERNRKSYQFK TFFSSDDPKS
ISLCELKTAN DVHLANIRYI PACRLTYFLE SKNDDNANGF AFDTKTGDWL SIDRMTKIQQ
EQEQHPEEAG RARYVKLFTE TTANAIYIQP LDALQLQDKG AVLTFLYAFK QAIEDVFQTE
GSEIGADVMG EVKIPNVLIY ENAEGSLGVL GRLVHEPEAY RTVVRRAYEI CYNTLEPLTD
EQRERLIPAD YTNLLNYYNQ PYHSQIDIRK IYHTLRMMWE ANIEIRVAGQ TESYDEQYAS
LERARDHNSS TEYEFLKYLY DHRLRLPNKA QPMFPEEYYV QPDFMYGDRI VIFCDGIPHD
RPDVQEDDRR KREVLEDAGY LVLAWHYATP LEDFITAHTD LFTPVS
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