ID G0MFX3_CAEBE Unreviewed; 1014 AA.
AC G0MFX3;
DT 19-OCT-2011, integrated into UniProtKB/TrEMBL.
DT 19-OCT-2011, sequence version 1.
DT 24-JAN-2024, entry version 41.
DE RecName: Full=Integrase catalytic domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=CAEBREN_31218 {ECO:0000313|EMBL:EGT54255.1};
OS Caenorhabditis brenneri (Nematode worm).
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=135651 {ECO:0000313|Proteomes:UP000008068};
RN [1] {ECO:0000313|Proteomes:UP000008068}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=PB2801 {ECO:0000313|Proteomes:UP000008068};
RG Caenorhabditis brenneri Sequencing and Analysis Consortium;
RA Wilson R.K.;
RL Submitted (JUL-2011) to the EMBL/GenBank/DDBJ databases.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; GL379792; EGT54255.1; -; Genomic_DNA.
DR AlphaFoldDB; G0MFX3; -.
DR STRING; 135651.G0MFX3; -.
DR EnsemblMetazoa; CBN31218.1; CBN31218.1; WBGene00193183.
DR eggNOG; KOG0017; Eukaryota.
DR HOGENOM; CLU_000384_9_6_1; -.
DR InParanoid; G0MFX3; -.
DR Proteomes; UP000008068; Unassembled WGS sequence.
DR GO; GO:0042575; C:DNA polymerase complex; IEA:UniProt.
DR GO; GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProt.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR CDD; cd09274; RNase_HI_RT_Ty3; 1.
DR CDD; cd01647; RT_LTR; 1.
DR Gene3D; 1.10.340.70; -; 1.
DR Gene3D; 2.30.30.850; -; 1.
DR Gene3D; 3.30.70.270; -; 2.
DR Gene3D; 3.10.10.10; HIV Type 1 Reverse Transcriptase, subunit A, domain 1; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR001584; Integrase_cat-core.
DR InterPro; IPR041588; Integrase_H2C2.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR000477; RT_dom.
DR InterPro; IPR041577; RT_RNaseH_2.
DR PANTHER; PTHR33064; POL PROTEIN; 1.
DR PANTHER; PTHR33064:SF35; RIBONUCLEASE H; 1.
DR Pfam; PF17921; Integrase_H2C2; 1.
DR Pfam; PF17919; RT_RNaseH_2; 1.
DR Pfam; PF00665; rve; 1.
DR Pfam; PF00078; RVT_1; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50994; INTEGRASE; 1.
DR PROSITE; PS50878; RT_POL; 1.
PE 4: Predicted;
KW Endonuclease {ECO:0000256|ARBA:ARBA00022759};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW Reference proteome {ECO:0000313|Proteomes:UP000008068};
KW RNA-directed DNA polymerase {ECO:0000256|ARBA:ARBA00022918};
KW Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT DOMAIN 101..279
FT /note="Reverse transcriptase"
FT /evidence="ECO:0000259|PROSITE:PS50878"
FT DOMAIN 651..812
FT /note="Integrase catalytic"
FT /evidence="ECO:0000259|PROSITE:PS50994"
FT REGION 939..1014
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 939..954
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 965..981
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1014 AA; 116393 MW; 7BDEBC686E49E846 CRC64;
MYNKNPNEGT TKIDQKEIDI LLEKIDLNQS KLSGKTKAEI RKLVSKYPEA FVLSNGKIGK
FTGVTTHHIP LLDEHTIPKA RPYRMNPEQK EKLEKELHKM QADEHIEPSS SPYSSPLLIV
PKKNGDIRIV IDYRKLNLIT RPRTYIMPHT LDVTEEASKG KIFSVFDIAS GFHHIRMNED
HKQRTAFCCH LGVFQYRVMP MGLKGSPDTF NQAMEEVKQK YSGSMIVYVD DIVLVSETEE
QHVKDLEEFF QLMIKMGLKL KAEKSQIGRT RITFLGFDIE NNTIQPNGEK TKAIREFPAP
RNITEVKQFL GMCSYFRRFI PGYAILVNPI NKLNKKGAEF EWKQEQQEAF EKVKEILMSP
PILTTPDMTG TFEMHTDASK IGLSAVLMQK QADLLKVVAY ASRPTTAVES RYPPIELEAL
AITWGLIHHK PYVFNRKVLV VTDHLPLKSL LHRKEKTMSG RLMRHEAIIQ QFDVEIVYRP
GKENYVADAL SRQRVPDTQT EAVSAIRASK LSEQKNLWTF QTWKKIQIES CALMKIKEKL
LSNRDDKETL KAKKKYLLIN DVIHLKPKNN MEIPPVILEG GSETTNKLIM DIHQIESHGG
PEKTRATISR FVVWKGMKDE IFRIVTTCQK CQRRKMIPTH QGSVPMGRWE IASGPFQRIH
MDVIGPFPET TDGNKYIIAA IDSFSRFAVA KATTDQKATT SLQFLIENIV SIHGIPNQVV
TDQGRNFTSK MFQEVSKLLE LDHIQTPSYH HESNGVIERL NRTLEEMLTC STKKPENFSD
WDKKLPIVIH AYNSRIHKAT GLAPEKIIFG RHTSSPLNLY VEVVQPQYHD QKDYADSLAE
IISDFIETAR EKSEVSRESY KTFYDKRHNV RDTNFQVGEK VLIQDFTAGK LEYQFSPPAT
VLKTTETTVT VRNHKNKVET IHKNRVKRHI TLESIMKKQK DQQAAQNNDM EGQADETIVG
QGMRGKPEGD EKMDSGVGSR RFVRRSRLHH ESIRRSRRLQ GLQPMADTLS QFPI
//