ID G0PBX4_CAEBE Unreviewed; 665 AA.
AC G0PBX4;
DT 19-OCT-2011, integrated into UniProtKB/TrEMBL.
DT 19-OCT-2011, sequence version 1.
DT 24-JAN-2024, entry version 44.
DE RecName: Full=Small ribosomal subunit protein mS39 {ECO:0000256|ARBA:ARBA00035134};
GN ORFNames=CAEBREN_21679 {ECO:0000313|EMBL:EGT50713.1};
OS Caenorhabditis brenneri (Nematode worm).
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=135651 {ECO:0000313|Proteomes:UP000008068};
RN [1] {ECO:0000313|Proteomes:UP000008068}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=PB2801 {ECO:0000313|Proteomes:UP000008068};
RG Caenorhabditis brenneri Sequencing and Analysis Consortium;
RA Wilson R.K.;
RL Submitted (JUL-2011) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Mitochondrion {ECO:0000256|ARBA:ARBA00004173}.
CC -!- SIMILARITY: Belongs to the mitochondrion-specific ribosomal protein
CC mS39 family. {ECO:0000256|ARBA:ARBA00008551}.
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DR EMBL; GL380222; EGT50713.1; -; Genomic_DNA.
DR AlphaFoldDB; G0PBX4; -.
DR STRING; 135651.G0PBX4; -.
DR EnsemblMetazoa; CBN21679.1; CBN21679.1; WBGene00160404.
DR eggNOG; KOG4422; Eukaryota.
DR HOGENOM; CLU_026264_1_0_1; -.
DR InParanoid; G0PBX4; -.
DR OMA; MDVCRNH; -.
DR Proteomes; UP000008068; Unassembled WGS sequence.
DR GO; GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
DR GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0043024; F:ribosomal small subunit binding; IEA:InterPro.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
DR GO; GO:0032543; P:mitochondrial translation; IEA:InterPro.
DR GO; GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR037387; PTCD3.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR PANTHER; PTHR16276; PENTATRICOPEPTIDE REPEAT DOMAIN-CONTAINING PROTEIN 3; 1.
DR PANTHER; PTHR16276:SF1; PENTATRICOPEPTIDE REPEAT DOMAIN-CONTAINING PROTEIN 3, MITOCHONDRIAL; 1.
DR Pfam; PF13812; PPR_3; 1.
DR PROSITE; PS51375; PPR; 1.
PE 3: Inferred from homology;
KW Mitochondrion {ECO:0000256|ARBA:ARBA00023128};
KW Reference proteome {ECO:0000313|Proteomes:UP000008068};
KW Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274};
KW Ribosomal protein {ECO:0000256|ARBA:ARBA00022980};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884};
KW rRNA-binding {ECO:0000256|ARBA:ARBA00022730};
KW Translation regulation {ECO:0000256|ARBA:ARBA00022845}.
FT REPEAT 281..319
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 665 AA; 75152 MW; 2B50E1B5562A026D CRC64;
MIGRIGLGRV LSRSLSTAEP AAVSQKLTIQ PAIERSPTDL LNALSETVGP DTTAPHFAYI
DDPITIPSTQ SAKKTYFMAK EFGKRAAREL ATEWPTLFAF DRDQPRLPAF RPQHLADPLQ
VAPTEKSLLA MIESREVQDS CILYERMRSE NVEVSEKTQM ELFRLVTYYN SSNIPYSEWE
NWAGMRNYGE DGQSVWKSGA VADLLFETLP KTDESVSIMI SGLCKYSDHA TLDRARQLYK
EHRASNGKIY REAFNGLIGA SSYSVAKKLA AEMASQNISP DIHTFNSLLT AATRSGKFEE
RVKSITEIIG EMKELGVEPA LSSYHIILKN LVDSKLLESE KRESDEQKNA YNRQLTLAVS
WLNEILSGIS GQTLVPVTSK CNLFFVEAMG ILYRASNEKL AEQLLSIYES KTNQVKMPEF
TIQSMFYNRY LQLAIEQTAS LNRIYDLYTS MVPRLVGVNN SLSSLVFRKI TAASDRHWLL
LRRVINDTIA SGQLNGALGE EVRKQLCEVQ LHTLGTSERE QFTALVQKLV AVWIEFSKFT
EERRRRLQRK LSPSQISECA LLLTRIGEQQ KAYELLELLL DEDASSGEEA TVYPRGHARP
WAMAELFEDA LRKRDTYGAA TCLQIMSLTA NRAKLEPLAN RILEKCNVNP DQKRILQGFV
RLRPQ
//