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Database: UniProt
Entry: G0PBX4_CAEBE
LinkDB: G0PBX4_CAEBE
Original site: G0PBX4_CAEBE 
ID   G0PBX4_CAEBE            Unreviewed;       665 AA.
AC   G0PBX4;
DT   19-OCT-2011, integrated into UniProtKB/TrEMBL.
DT   19-OCT-2011, sequence version 1.
DT   24-JAN-2024, entry version 44.
DE   RecName: Full=Small ribosomal subunit protein mS39 {ECO:0000256|ARBA:ARBA00035134};
GN   ORFNames=CAEBREN_21679 {ECO:0000313|EMBL:EGT50713.1};
OS   Caenorhabditis brenneri (Nematode worm).
OC   Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC   Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC   Caenorhabditis.
OX   NCBI_TaxID=135651 {ECO:0000313|Proteomes:UP000008068};
RN   [1] {ECO:0000313|Proteomes:UP000008068}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=PB2801 {ECO:0000313|Proteomes:UP000008068};
RG   Caenorhabditis brenneri Sequencing and Analysis Consortium;
RA   Wilson R.K.;
RL   Submitted (JUL-2011) to the EMBL/GenBank/DDBJ databases.
CC   -!- SUBCELLULAR LOCATION: Mitochondrion {ECO:0000256|ARBA:ARBA00004173}.
CC   -!- SIMILARITY: Belongs to the mitochondrion-specific ribosomal protein
CC       mS39 family. {ECO:0000256|ARBA:ARBA00008551}.
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DR   EMBL; GL380222; EGT50713.1; -; Genomic_DNA.
DR   AlphaFoldDB; G0PBX4; -.
DR   STRING; 135651.G0PBX4; -.
DR   EnsemblMetazoa; CBN21679.1; CBN21679.1; WBGene00160404.
DR   eggNOG; KOG4422; Eukaryota.
DR   HOGENOM; CLU_026264_1_0_1; -.
DR   InParanoid; G0PBX4; -.
DR   OMA; MDVCRNH; -.
DR   Proteomes; UP000008068; Unassembled WGS sequence.
DR   GO; GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
DR   GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR   GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR   GO; GO:0043024; F:ribosomal small subunit binding; IEA:InterPro.
DR   GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0032543; P:mitochondrial translation; IEA:InterPro.
DR   GO; GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR   InterPro; IPR002885; Pentatricopeptide_rpt.
DR   InterPro; IPR037387; PTCD3.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   PANTHER; PTHR16276; PENTATRICOPEPTIDE REPEAT DOMAIN-CONTAINING PROTEIN 3; 1.
DR   PANTHER; PTHR16276:SF1; PENTATRICOPEPTIDE REPEAT DOMAIN-CONTAINING PROTEIN 3, MITOCHONDRIAL; 1.
DR   Pfam; PF13812; PPR_3; 1.
DR   PROSITE; PS51375; PPR; 1.
PE   3: Inferred from homology;
KW   Mitochondrion {ECO:0000256|ARBA:ARBA00023128};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008068};
KW   Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274};
KW   Ribosomal protein {ECO:0000256|ARBA:ARBA00022980};
KW   RNA-binding {ECO:0000256|ARBA:ARBA00022884};
KW   rRNA-binding {ECO:0000256|ARBA:ARBA00022730};
KW   Translation regulation {ECO:0000256|ARBA:ARBA00022845}.
FT   REPEAT          281..319
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ   SEQUENCE   665 AA;  75152 MW;  2B50E1B5562A026D CRC64;
     MIGRIGLGRV LSRSLSTAEP AAVSQKLTIQ PAIERSPTDL LNALSETVGP DTTAPHFAYI
     DDPITIPSTQ SAKKTYFMAK EFGKRAAREL ATEWPTLFAF DRDQPRLPAF RPQHLADPLQ
     VAPTEKSLLA MIESREVQDS CILYERMRSE NVEVSEKTQM ELFRLVTYYN SSNIPYSEWE
     NWAGMRNYGE DGQSVWKSGA VADLLFETLP KTDESVSIMI SGLCKYSDHA TLDRARQLYK
     EHRASNGKIY REAFNGLIGA SSYSVAKKLA AEMASQNISP DIHTFNSLLT AATRSGKFEE
     RVKSITEIIG EMKELGVEPA LSSYHIILKN LVDSKLLESE KRESDEQKNA YNRQLTLAVS
     WLNEILSGIS GQTLVPVTSK CNLFFVEAMG ILYRASNEKL AEQLLSIYES KTNQVKMPEF
     TIQSMFYNRY LQLAIEQTAS LNRIYDLYTS MVPRLVGVNN SLSSLVFRKI TAASDRHWLL
     LRRVINDTIA SGQLNGALGE EVRKQLCEVQ LHTLGTSERE QFTALVQKLV AVWIEFSKFT
     EERRRRLQRK LSPSQISECA LLLTRIGEQQ KAYELLELLL DEDASSGEEA TVYPRGHARP
     WAMAELFEDA LRKRDTYGAA TCLQIMSLTA NRAKLEPLAN RILEKCNVNP DQKRILQGFV
     RLRPQ
//
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