ID G0T004_RHOT2 Unreviewed; 1012 AA.
AC G0T004;
DT 19-OCT-2011, integrated into UniProtKB/TrEMBL.
DT 19-OCT-2011, sequence version 1.
DT 08-NOV-2023, entry version 44.
DE SubName: Full=Putative WD-repeat protein {ECO:0000313|EMBL:EGU11725.1};
GN ORFNames=RTG_02537 {ECO:0000313|EMBL:EGU11725.1};
OS Rhodosporidium toruloides (strain ATCC 204091 / IIP 30 / MTCC 1151) (Yeast)
OS (Rhodotorula glutinis (strain ATCC 204091)).
OC Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina;
OC Microbotryomycetes; Sporidiobolales; Sporidiobolaceae; Rhodotorula.
OX NCBI_TaxID=1001064 {ECO:0000313|EMBL:EGU11725.1, ECO:0000313|Proteomes:UP000006141};
RN [1] {ECO:0000313|EMBL:EGU11725.1, ECO:0000313|Proteomes:UP000006141}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 204091 / IIP 30 / MTCC 1151
RC {ECO:0000313|Proteomes:UP000006141};
RX PubMed=24526636; DOI=10.1128/genomeA.00046-14;
RA Paul D., Magbanua Z., Arick M.II., French T., Bridges S.M., Burgess S.C.,
RA Lawrence M.L.;
RT "Genome sequence of the oleaginous yeast Rhodotorula glutinis ATCC
RT 204091.";
RL Genome Announc. 2:E0004614-E0004614(2014).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EGU11725.1}.
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DR EMBL; AEVR02000005; EGU11725.1; -; Genomic_DNA.
DR AlphaFoldDB; G0T004; -.
DR HOGENOM; CLU_002774_2_1_1; -.
DR InParanoid; G0T004; -.
DR Proteomes; UP000006141; Unassembled WGS sequence.
DR GO; GO:0032040; C:small-subunit processome; IEA:InterPro.
DR GO; GO:0006364; P:rRNA processing; IEA:InterPro.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 2.
DR InterPro; IPR011047; Quinoprotein_ADH-like_supfam.
DR InterPro; IPR007319; SSU_processome_Utp21.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR22840; WD REPEAT-CONTAINING PROTEIN 36; 1.
DR PANTHER; PTHR22840:SF12; WD REPEAT-CONTAINING PROTEIN 36; 1.
DR Pfam; PF04192; Utp21; 1.
DR Pfam; PF00400; WD40; 2.
DR SMART; SM00320; WD40; 8.
DR SUPFAM; SSF50998; Quinoprotein alcohol dehydrogenase-like; 1.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 2.
DR PROSITE; PS50294; WD_REPEATS_REGION; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000006141};
KW WD repeat {ECO:0000256|PROSITE-ProRule:PRU00221}.
FT REPEAT 385..416
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 671..712
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT DOMAIN 800..1007
FT /note="Small-subunit processome Utp21"
FT /evidence="ECO:0000259|Pfam:PF04192"
FT REGION 1..24
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 122..174
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 208..235
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..18
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 128..158
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1012 AA; 109259 MW; EC6D29921B9A9867 CRC64;
MSRPTKRARV QQQPASAATP AKPKREPLFA PFRSLGHVST GVPFVLQSRA SKHLQQPALT
VITSLGASWA MWEGQSMRLL FVGPDMGKPI TSMAVLNESV FAAAGNMVGR FVRGKEVGRF
VTGGGRTNGA YDSDSDSSDS DSSSSASSSS SSSASSSSDS DSDDEDDPLS PIPESLDNLV
LFGNTLIALS STGRRMYVWD VPPYIKPASK DPLAKEGEEE GDVAGSETDE EQDERVVTPY
ATLEFPTGFT ATKVLHPASY LNKVVVGSKE GEVAVWNVRT GSCIHTFPSS ALAGSHPASA
VTSLSQSPAI DVLGIGLATG ACILFDVRLG EVLGKVRLEG EGAGEVAALS FRTDSEAQTL
AVASTSGHVA LFDLGNEMKL LHLVRNAHEG PVGGLEWVPG QPLMITSGGD NSVKQWLLDT
PTAAPRLLKQ RSGHHAPPHF VRYNADDGKS LLTAGADRSL RYTSVVRDSR GYELSQGSIA
RKATRLDVRP SSLKLPLITS LAYSTARARD WDDVVSVSAD ESLGRSWSVE NKRVGKWTFA
TEGKATVSAV TACGNFGLVG SQAGDVQMFN MQSGMKRKVF KVPNAGVTDV RGRHVTGLAI
DALNRCVVVS TLKGALHFFD FQTMKLMSIL TLKASVTSIL LQRDNGLLAA VCDDLIVRIV
DIETRRVVRE LSGPRGRILD IAFSPDSRWI ITTSQDSVIR TFDIPTGQLV DAFRTKTVAT
SLTFSPTGDF LASTHVDSVG IYLWANRAQF SDVSLLSFVE EETLEDVALP TVQGVDADAS
LSAISAPSRW EDIQPYTTPD QLADSLLTLS LMPRSRWQTL LNLDTIKARN KPKEAPKAPE
RAPFFLPTLP GVDHRFDFGT SAPNGAAKEK KDDAAQKRKL DFAVGAAVET DFVRRLTSEK
KDGNYQSFFE YLKALSPSNV DLEIRSLSTI PHLEAFLHAL LARLRSHRDF EACQTFLAVF
LRIHGDILIA NPDTKGPLEA IAEQQKKEAE RLIDLTHYNL GTLAFLRGVA LT
//
