ID   G0VKH9_NAUCC            Unreviewed;       963 AA.
AC   G0VKH9;
DT   19-OCT-2011, integrated into UniProtKB/TrEMBL.
DT   19-OCT-2011, sequence version 1.
DT   27-MAR-2024, entry version 53.
DE   RecName: Full=Mitochondrial group I intron splicing factor CCM1 {ECO:0000256|ARBA:ARBA00019650};
GN   Name=NCAS0J00330 {ECO:0000313|EMBL:CCC72013.1};
GN   OrderedLocusNames=NCAS_0J00330 {ECO:0000313|EMBL:CCC72013.1};
OS   Naumovozyma castellii (strain ATCC 76901 / BCRC 22586 / CBS 4309 / NBRC
OS   1992 / NRRL Y-12630) (Yeast) (Saccharomyces castellii).
OC   Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes;
OC   Saccharomycetales; Saccharomycetaceae; Naumovozyma.
OX   NCBI_TaxID=1064592 {ECO:0000313|EMBL:CCC72013.1, ECO:0000313|Proteomes:UP000001640};
RN   [1] {ECO:0000313|EMBL:CCC72013.1, ECO:0000313|Proteomes:UP000001640}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 76901 / BCRC 22586 / CBS 4309 / NBRC 1992 / NRRL Y-12630
RC   {ECO:0000313|Proteomes:UP000001640};
RX   PubMed=22123960; DOI=10.1073/pnas.1112808108;
RA   Gordon J.L., Armisen D., Proux-Wera E., OhEigeartaigh S.S., Byrne K.P.,
RA   Wolfe K.H.;
RT   "Evolutionary erosion of yeast sex chromosomes by mating-type switching
RT   accidents.";
RL   Proc. Natl. Acad. Sci. U.S.A. 108:20024-20029(2011).
RN   [2]
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=Type strain:CBS 4309;
RA   Gordon J.L., Armisen D., Proux-Wera E., OhEigeartaigh S.S., Byrne K.P.,
RA   Wolfe K.H.;
RT   "Genome sequence of Naumovozyma castellii.";
RL   Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: RNA-binding protein involved in the specific removal of group
CC       I introns in mitochondrial encoded transcripts. Maintains the stability
CC       of the small subunit mitochondrial 15S rRNA and thus the expression of
CC       the mitochondrial genome. {ECO:0000256|ARBA:ARBA00024866}.
CC   -!- SIMILARITY: Belongs to the CCM1 family.
CC       {ECO:0000256|ARBA:ARBA00006192}.
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DR   EMBL; HE576761; CCC72013.1; -; Genomic_DNA.
DR   RefSeq; XP_003678355.1; XM_003678307.1.
DR   AlphaFoldDB; G0VKH9; -.
DR   STRING; 1064592.G0VKH9; -.
DR   GeneID; 11525857; -.
DR   KEGG; ncs:NCAS_0J00330; -.
DR   eggNOG; KOG4197; Eukaryota.
DR   HOGENOM; CLU_306786_0_0_1; -.
DR   InParanoid; G0VKH9; -.
DR   OMA; YFMKSYL; -.
DR   OrthoDB; 2046221at2759; -.
DR   Proteomes; UP000001640; Chromosome 10.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 2.
DR   InterPro; IPR002885; Pentatricopeptide_rpt.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   PANTHER; PTHR47934; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PET309, MITOCHONDRIAL; 1.
DR   PANTHER; PTHR47934:SF6; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PET309, MITOCHONDRIAL-RELATED; 1.
DR   Pfam; PF01535; PPR; 1.
DR   PROSITE; PS51375; PPR; 1.
PE   3: Inferred from homology;
KW   mRNA processing {ECO:0000256|ARBA:ARBA00022664};
KW   mRNA splicing {ECO:0000256|ARBA:ARBA00023187};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001640}.
FT   REPEAT          337..371
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ   SEQUENCE   963 AA;  112367 MW;  8AAE49A9D50615FC CRC64;
     MRRYVVPATQ VMRDKIRNAQ IPKGLKYILS VNNNSKALST KECTALSAHF FAPKDNKNIT
     PDLRLYVSQF LYRKEAYQLL LNFGKHFFID NSNGTSGKSL TLRNDLVSAE LKCFLFALIR
     LNNLPYLDIV MGRIISQFSL TQKETVIHIL NAVFNYMILR SKDHITNLNC QEIIIHWVKW
     MKLLNGHCEF SNYSTYKYIL RSLSIYIRTL NAEEKKSLLD CLEKIKLILG AQSASQFATT
     LISIFTRHRD FNMVEPLWFY KTNNDLQLSS FDLTSILQTY CHYGKFNLVA STFEHYPEAH
     DDSAQFDYCL IAHSKLSDWE GLQKQFNSLF GIGKLPNIKE YGIVMFALAQ MGELESVEQL
     YAQLLRRGML PTYAVLESLL ISYYKAGDYI GCFTQFELFQ KYAIQPTSST YTIIFKAYRG
     MSDIDGALRF LRRKTSKETV KITETHFAIL IQMCSKTTNY LIAAELFHIM KSHYNIIPTG
     KSVAALMDVY IESGLYEKAL SLFDEYTQQD NKVSRDDEML QDNVISVYNK AILVHIKRNE
     PEKCESLFEK VTQLQIPTDS PFYKMMIQYM IETKKDYPSA LDILDKLLTS DTVQATTSHF
     EVIMAHCNHI SYHEGIFQLY KKMNEYNVPM NSRILYYLIK STFKVNITNK EGVDNAIELL
     NEIMENVARG TMNVTINRLH PSVMAWPMRV ITKYYSPKDA LNLFNKYHQL FYGKDDTIMS
     NKFSILRSFM VLFAEIEQWE QFERVYEKFL ARLETIEQLP SHTVKNSKLK GLFIGIISYK
     IRQLNATQQI DKLPGLVENL QSRGFILDNK SWNDVILALF QDPRTIHDGL KLVNDKFIHG
     FNLIHKYRFL KNKKENAELR DGKEPWLLSQ KEKDPNSFQP KLYLKSDVYL RIMESLDGYL
     NSLGETHLDD TIKSFLSKYG YFMKSYLMTP RINVTGWESF ENDHMQYLQQ LRQMKRIVPL
     SEY
//