GenomeNet

Database: UniProt
Entry: G1MQF4_MELGA
LinkDB: G1MQF4_MELGA
Original site: G1MQF4_MELGA 
ID   G1MQF4_MELGA            Unreviewed;       718 AA.
AC   G1MQF4;
DT   19-OCT-2011, integrated into UniProtKB/TrEMBL.
DT   29-SEP-2021, sequence version 3.
DT   24-JAN-2024, entry version 70.
DE   RecName: Full=SAM domain-containing protein {ECO:0000259|PROSITE:PS50105};
GN   Name=SCMH1 {ECO:0000313|Ensembl:ENSMGAP00000000306.3};
OS   Meleagris gallopavo (Wild turkey).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC   Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae;
OC   Meleagridinae; Meleagris.
OX   NCBI_TaxID=9103 {ECO:0000313|Ensembl:ENSMGAP00000000306.3, ECO:0000313|Proteomes:UP000001645};
RN   [1] {ECO:0000313|Ensembl:ENSMGAP00000000306.3, ECO:0000313|Proteomes:UP000001645}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=20838655; DOI=10.1371/journal.pbio.1000475;
RA   Dalloul R.A., Long J.A., Zimin A.V., Aslam L., Beal K., Blomberg L.A.,
RA   Bouffard P., Burt D.W., Crasta O., Crooijmans R.P., Cooper K.,
RA   Coulombe R.A., De S., Delany M.E., Dodgson J.B., Dong J.J., Evans C.,
RA   Frederickson K.M., Flicek P., Florea L., Folkerts O., Groenen M.A.,
RA   Harkins T.T., Herrero J., Hoffmann S., Megens H.J., Jiang A., de Jong P.,
RA   Kaiser P., Kim H., Kim K.W., Kim S., Langenberger D., Lee M.K., Lee T.,
RA   Mane S., Marcais G., Marz M., McElroy A.P., Modise T., Nefedov M.,
RA   Notredame C., Paton I.R., Payne W.S., Pertea G., Prickett D., Puiu D.,
RA   Qioa D., Raineri E., Ruffier M., Salzberg S.L., Schatz M.C., Scheuring C.,
RA   Schmidt C.J., Schroeder S., Searle S.M., Smith E.J., Smith J.,
RA   Sonstegard T.S., Stadler P.F., Tafer H., Tu Z.J., Van Tassell C.P.,
RA   Vilella A.J., Williams K.P., Yorke J.A., Zhang L., Zhang H.B., Zhang X.,
RA   Zhang Y., Reed K.M.;
RT   "Multi-platform next-generation sequencing of the domestic turkey
RT   (Meleagris gallopavo): genome assembly and analysis.";
RL   PLoS Biol. 8:E1000475-E1000475(2010).
RN   [2] {ECO:0000313|Ensembl:ENSMGAP00000000306.3}
RP   IDENTIFICATION.
RG   Ensembl;
RL   Submitted (JUL-2023) to UniProtKB.
CC   -!- SIMILARITY: Belongs to the SCM family. {ECO:0000256|ARBA:ARBA00008469}.
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DR   RefSeq; XP_010721574.1; XM_010723272.2.
DR   AlphaFoldDB; G1MQF4; -.
DR   Ensembl; ENSMGAT00000000942.3; ENSMGAP00000000306.3; ENSMGAG00000000902.3.
DR   GeneID; 100542812; -.
DR   KEGG; mgp:100542812; -.
DR   CTD; 22955; -.
DR   GeneTree; ENSGT00940000157999; -.
DR   HOGENOM; CLU_015000_1_1_1; -.
DR   InParanoid; G1MQF4; -.
DR   TreeFam; TF106488; -.
DR   Proteomes; UP000001645; Chromosome 25.
DR   Bgee; ENSMGAG00000000902; Expressed in gizzard and 17 other cell types or tissues.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR   CDD; cd20105; MBT_SCMH1_rpt1; 1.
DR   CDD; cd20108; MBT_SCMH1_rpt2; 1.
DR   CDD; cd09578; SAM_Scm; 1.
DR   Gene3D; 2.30.30.140; -; 2.
DR   Gene3D; 3.90.1150.190; SLED domain; 1.
DR   Gene3D; 1.10.150.50; Transcription Factor, Ets-1; 1.
DR   InterPro; IPR004092; Mbt.
DR   InterPro; IPR047279; MBT_SCMH1_rpt1.
DR   InterPro; IPR047280; MBT_SCMH1_rpt2.
DR   InterPro; IPR001660; SAM.
DR   InterPro; IPR013761; SAM/pointed_sf.
DR   InterPro; IPR047531; SAM_Scm-like.
DR   InterPro; IPR033763; SCML2_RBR.
DR   InterPro; IPR021987; SLED.
DR   InterPro; IPR038348; SLED_sf.
DR   PANTHER; PTHR12247; POLYCOMB GROUP PROTEIN; 1.
DR   PANTHER; PTHR12247:SF68; POLYCOMB PROTEIN SCMH1; 1.
DR   Pfam; PF02820; MBT; 2.
DR   Pfam; PF17208; RBR; 1.
DR   Pfam; PF00536; SAM_1; 1.
DR   Pfam; PF12140; SLED; 1.
DR   SMART; SM00561; MBT; 2.
DR   SMART; SM00454; SAM; 1.
DR   SUPFAM; SSF47769; SAM/Pointed domain; 1.
DR   SUPFAM; SSF63748; Tudor/PWWP/MBT; 2.
DR   PROSITE; PS51079; MBT; 2.
DR   PROSITE; PS50105; SAM_DOMAIN; 1.
PE   3: Inferred from homology;
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001645};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737};
KW   Repressor {ECO:0000256|ARBA:ARBA00022491}.
FT   REPEAT          61..159
FT                   /note="MBT"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00459"
FT   REPEAT          167..268
FT                   /note="MBT"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00459"
FT   DOMAIN          651..716
FT                   /note="SAM"
FT                   /evidence="ECO:0000259|PROSITE:PS50105"
FT   REGION          17..55
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          276..384
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          501..575
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          615..644
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        19..50
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        283..302
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        355..384
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        507..522
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        615..631
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   718 AA;  79775 MW;  1FD13940B730C0AC CRC64;
     MALSFVLGVF SYVKASRSHN KDGSGDRMRK PGPQKAIDWK DGKKHKYGRP PESPSQYQGH
     FTWEKYLKET CVVPAPAHCF KQSYTPPANE FKINMKLEAQ DPRNTTSTCI ATVVGLTGAR
     LRLRLDGSDN KNDFWRLVDS AEIQPIGNCE KNGGMLQPPL GFRLNASSWP MFLLKTLNGA
     EMAPIRIFHK EPPSPSQNFF KTGMKLEAVD RKNPHFICPA TIGEVRGSEV LITFDGWRGA
     FDYWCRYDSR DIFPVGWCSL TGDNLQPPGT KVVIPKSPLP ASEVNSEKPS MHSSTKTVLG
     HQQGQGRRKA GKKRGRTTKA LIHQPMPAPS KSVEPLKFPR KRGPKPGSKR KPRTLLSPAP
     TSPTTSTPEP DTSTVPQDAA TVPSSAMQAP TVCIYLNKNG SAGPHLDKKK IQRLPDHFGP
     ARASVVLQQA VQACIDCAYH QKTVFSFLKQ GHGGEVISAV FDREQHTLNL PAVNSITYVL
     RFLEKLCHNL RSDNLFGNQP FSQHSHAPRS HEYDHDRYLP DRSSSLDGTL QGPGRGTKRY
     CQDSPPYSAP LSPKLPKNDR HPLEGETFVL GDGPPGPLEP RMDPMDSALN AVNASGHSRS
     SREFRLQGYR HLHQPCSLSQ GSTSTLGRLG STGSERYRDG TRLSSRDPSC WTVEEVMQFI
     READPQLGPH ADLFRKHEID GKALLLLRSD MMMKYMGLKL GPALKLTYHI DKLKQGKF
//
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