ID G1NCS8_MELGA Unreviewed; 1246 AA.
AC G1NCS8;
DT 19-OCT-2011, integrated into UniProtKB/TrEMBL.
DT 29-SEP-2021, sequence version 3.
DT 27-MAR-2024, entry version 71.
DE SubName: Full=Leucine rich pentatricopeptide repeat containing {ECO:0000313|Ensembl:ENSMGAP00000010584.3};
GN Name=LRPPRC {ECO:0000313|Ensembl:ENSMGAP00000010584.3};
OS Meleagris gallopavo (Wild turkey).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae;
OC Meleagridinae; Meleagris.
OX NCBI_TaxID=9103 {ECO:0000313|Ensembl:ENSMGAP00000010584.3, ECO:0000313|Proteomes:UP000001645};
RN [1] {ECO:0000313|Ensembl:ENSMGAP00000010584.3, ECO:0000313|Proteomes:UP000001645}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=20838655; DOI=10.1371/journal.pbio.1000475;
RA Dalloul R.A., Long J.A., Zimin A.V., Aslam L., Beal K., Blomberg L.A.,
RA Bouffard P., Burt D.W., Crasta O., Crooijmans R.P., Cooper K.,
RA Coulombe R.A., De S., Delany M.E., Dodgson J.B., Dong J.J., Evans C.,
RA Frederickson K.M., Flicek P., Florea L., Folkerts O., Groenen M.A.,
RA Harkins T.T., Herrero J., Hoffmann S., Megens H.J., Jiang A., de Jong P.,
RA Kaiser P., Kim H., Kim K.W., Kim S., Langenberger D., Lee M.K., Lee T.,
RA Mane S., Marcais G., Marz M., McElroy A.P., Modise T., Nefedov M.,
RA Notredame C., Paton I.R., Payne W.S., Pertea G., Prickett D., Puiu D.,
RA Qioa D., Raineri E., Ruffier M., Salzberg S.L., Schatz M.C., Scheuring C.,
RA Schmidt C.J., Schroeder S., Searle S.M., Smith E.J., Smith J.,
RA Sonstegard T.S., Stadler P.F., Tafer H., Tu Z.J., Van Tassell C.P.,
RA Vilella A.J., Williams K.P., Yorke J.A., Zhang L., Zhang H.B., Zhang X.,
RA Zhang Y., Reed K.M.;
RT "Multi-platform next-generation sequencing of the domestic turkey
RT (Meleagris gallopavo): genome assembly and analysis.";
RL PLoS Biol. 8:E1000475-E1000475(2010).
RN [2] {ECO:0000313|Ensembl:ENSMGAP00000010584.3}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
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DR AlphaFoldDB; G1NCS8; -.
DR Ensembl; ENSMGAT00000011445.3; ENSMGAP00000010584.3; ENSMGAG00000010201.3.
DR GeneTree; ENSGT00960000186682; -.
DR HOGENOM; CLU_006166_0_0_1; -.
DR InParanoid; G1NCS8; -.
DR TreeFam; TF323626; -.
DR Proteomes; UP000001645; Chromosome 2.
DR Bgee; ENSMGAG00000010201; Expressed in heart and 17 other cell types or tissues.
DR GO; GO:0000794; C:condensed nuclear chromosome; IEA:Ensembl.
DR GO; GO:0005874; C:microtubule; IEA:Ensembl.
DR GO; GO:0042645; C:mitochondrial nucleoid; IEA:Ensembl.
DR GO; GO:0048471; C:perinuclear region of cytoplasm; IEA:Ensembl.
DR GO; GO:1990904; C:ribonucleoprotein complex; IEA:Ensembl.
DR GO; GO:0048487; F:beta-tubulin binding; IEA:Ensembl.
DR GO; GO:0003723; F:RNA binding; IEA:Ensembl.
DR GO; GO:0003697; F:single-stranded DNA binding; IEA:Ensembl.
DR GO; GO:0031625; F:ubiquitin protein ligase binding; IEA:Ensembl.
DR GO; GO:0000957; P:mitochondrial RNA catabolic process; IEA:Ensembl.
DR GO; GO:0000961; P:negative regulation of mitochondrial RNA catabolic process; IEA:Ensembl.
DR GO; GO:0070129; P:regulation of mitochondrial translation; IEA:Ensembl.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR InterPro; IPR033490; LRP130.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 2.
DR PANTHER; PTHR46669; LEUCINE-RICH PPR MOTIF-CONTAINING PROTEIN, MITOCHONDRIAL; 1.
DR PANTHER; PTHR46669:SF1; LEUCINE-RICH PPR MOTIF-CONTAINING PROTEIN, MITOCHONDRIAL; 1.
DR Pfam; PF01535; PPR; 2.
DR Pfam; PF13812; PPR_3; 2.
DR PROSITE; PS51375; PPR; 3.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000001645}.
FT REPEAT 203..237
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 238..272
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 674..708
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 1246 AA; 141795 MW; E25A3C29C1DAA60C CRC64;
MVSCYCFARS ASWLYFLQLS YFILRKQVVK QIQYLFGLCS RMTASHLLLR VLKDGELCHC
LQARFLTVVP QHEGSFKEEA VSEIQSRRAF DWALNKLDNS VRKTGRIPKT LLLKVFQETC
REGCPGSNQT LLLLRSCGAL LPEVLSSERT ELVHMIWDKM KELGAVYDTS HYNALLKVYL
QNEHKFSPTE FLARMEEANV QPNRVTYQRL IAAYCNEGDI EGASKILGFM KSKDLPITEA
VFSSLVKGHA RSGDIKSAEN ILSVMRVAGV EPGPDTYLSL LNVYAEKGDA DSIKKTLEEV
EKTGGYLMDR VLMQVIFSLA KAGYPQYIED IKERIRFEKE LIPDMMNLCL TLITHGFEDI
SFRILKSYNH LSRENVDQGS FFLQHCVNRN MPISKLKQFC YELKEAKMHS SPLIFILRCA
LETNKSDLAI DVMKAMKEEG LPIRPHYCWP LLVGFQKEKN LKGVFEVLKV MHELGVELNA
ETYTDYVFKN FADIETACAQ MKVSLHLEYI KMIIVLFVLI TELLYKDERY CLTPPGPTEA
VGYFLYHLID SMSDSEVQAK EERLRQYFHQ LKKMVPFHFL LHNACPSAKS DVSALEKKLE
KRKAENQPIT DVLKQLIYAL CEEENMQKAL EVKAKYEPDM VVGGYAALIN LCCRHDNLEE
AMNLKEKVSP VALDSGKYIA LVEALAKHGR LEDAISILTE MKEKDVPISD RAVASFFRLL
NAAAIRGEVE TVNRLHETIV NLGLAETAAL YSPLITVHLE KDDMPAALEA LMDCYKKHGK
ILQLHNIYCR LIEKGDTELL QKVSDFISSE YGDMMALYDL FFAFLQTGKY KEARKVIETP
GLRAHSGRLQ WFAKRCITGN QMETLEHLVE LTQNVFECDR DEMYYYLLQL YNNSDWRRAE
AVWTKIQEEN VVPREKTLRL LADILEKNGQ VVPFEVPKAY NVFLKSQGKS DYQYRTYDIL
IKALLSLDCI EEAKRVKHIA ETHIKGFTLN SAASSLLIIS QVRRDYLKDA VAAFQGMLDS
GLLPSRPAVI ALTQALAMKG DLRNLKALEN MVESITKSIG LSSSLISNAI ALAHTQNNDL
DAAVEYLEPL LISGAQDPDQ PVKNISFLLR KVSEKGLEPA LEKFGVMAER LANQFGIYRP
VTDLFLQYVS ADRVDDARSL LQFWQFYLKI ETLLELIPDN VDLETAYRHL LRCYELDGDV
ASVKAVYEKT KEKNIQLPEL SLKSLAAFLK KAGEPVPFTE PPVSIS
//
