GenomeNet

Database: UniProt
Entry: G1NHI2_MELGA
LinkDB: G1NHI2_MELGA
Original site: G1NHI2_MELGA 
ID   G1NHI2_MELGA            Unreviewed;       646 AA.
AC   G1NHI2;
DT   19-OCT-2011, integrated into UniProtKB/TrEMBL.
DT   16-NOV-2011, sequence version 2.
DT   22-NOV-2017, entry version 47.
DE   SubName: Full=Cyclic nucleotide gated channel alpha 1 {ECO:0000313|Ensembl:ENSMGAP00000012638};
GN   Name=CNGA1 {ECO:0000313|Ensembl:ENSMGAP00000012638};
OS   Meleagris gallopavo (Wild turkey).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC   Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes;
OC   Phasianidae; Meleagridinae; Meleagris.
OX   NCBI_TaxID=9103 {ECO:0000313|Ensembl:ENSMGAP00000012638, ECO:0000313|Proteomes:UP000001645};
RN   [1] {ECO:0000313|Ensembl:ENSMGAP00000012638, ECO:0000313|Proteomes:UP000001645}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=20838655; DOI=10.1371/journal.pbio.1000475;
RA   Dalloul R.A., Long J.A., Zimin A.V., Aslam L., Beal K., Blomberg L.A.,
RA   Bouffard P., Burt D.W., Crasta O., Crooijmans R.P., Cooper K.,
RA   Coulombe R.A., De S., Delany M.E., Dodgson J.B., Dong J.J., Evans C.,
RA   Frederickson K.M., Flicek P., Florea L., Folkerts O., Groenen M.A.,
RA   Harkins T.T., Herrero J., Hoffmann S., Megens H.J., Jiang A.,
RA   de Jong P., Kaiser P., Kim H., Kim K.W., Kim S., Langenberger D.,
RA   Lee M.K., Lee T., Mane S., Marcais G., Marz M., McElroy A.P.,
RA   Modise T., Nefedov M., Notredame C., Paton I.R., Payne W.S.,
RA   Pertea G., Prickett D., Puiu D., Qioa D., Raineri E., Ruffier M.,
RA   Salzberg S.L., Schatz M.C., Scheuring C., Schmidt C.J., Schroeder S.,
RA   Searle S.M., Smith E.J., Smith J., Sonstegard T.S., Stadler P.F.,
RA   Tafer H., Tu Z.J., Van Tassell C.P., Vilella A.J., Williams K.P.,
RA   Yorke J.A., Zhang L., Zhang H.B., Zhang X., Zhang Y., Reed K.M.;
RT   "Multi-platform next-generation sequencing of the domestic turkey
RT   (Meleagris gallopavo): genome assembly and analysis.";
RL   PLoS Biol. 8:E1000475-E1000475(2010).
RN   [2] {ECO:0000313|Ensembl:ENSMGAP00000012638}
RP   IDENTIFICATION.
RG   Ensembl;
RL   Submitted (SEP-2011) to UniProtKB.
CC   -!- CAUTION: The sequence shown here is derived from an Ensembl
CC       automatic analysis pipeline and should be considered as
CC       preliminary data. {ECO:0000313|Ensembl:ENSMGAP00000012638}.
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DR   STRING; 9103.ENSMGAP00000012638; -.
DR   Ensembl; ENSMGAT00000013534; ENSMGAP00000012638; ENSMGAG00000012038.
DR   eggNOG; KOG0500; Eukaryota.
DR   eggNOG; ENOG410YWWI; LUCA.
DR   GeneTree; ENSGT00900000140801; -.
DR   InParanoid; G1NHI2; -.
DR   OMA; CMYFAIS; -.
DR   OrthoDB; EOG091G03EW; -.
DR   TreeFam; TF319048; -.
DR   Proteomes; UP000001645; Chromosome 4.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0042622; C:photoreceptor outer segment membrane; IEA:Ensembl.
DR   GO; GO:0005221; F:intracellular cyclic nucleotide activated cation channel activity; IEA:InterPro.
DR   GO; GO:0007601; P:visual perception; IEA:InterPro.
DR   CDD; cd00038; CAP_ED; 1.
DR   Gene3D; 2.60.120.10; -; 1.
DR   InterPro; IPR032406; CLZ_dom.
DR   InterPro; IPR032945; CNGA1.
DR   InterPro; IPR018490; cNMP-bd-like.
DR   InterPro; IPR018488; cNMP-bd_CS.
DR   InterPro; IPR000595; cNMP-bd_dom.
DR   InterPro; IPR005821; Ion_trans_dom.
DR   InterPro; IPR014710; RmlC-like_jellyroll.
DR   PANTHER; PTHR10217:SF387; PTHR10217:SF387; 1.
DR   Pfam; PF16526; CLZ; 1.
DR   Pfam; PF00027; cNMP_binding; 1.
DR   Pfam; PF00520; Ion_trans; 1.
DR   SMART; SM00100; cNMP; 1.
DR   SUPFAM; SSF51206; SSF51206; 1.
DR   PROSITE; PS00888; CNMP_BINDING_1; 1.
DR   PROSITE; PS00889; CNMP_BINDING_2; 1.
DR   PROSITE; PS50042; CNMP_BINDING_3; 1.
PE   4: Predicted;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Complete proteome {ECO:0000313|Proteomes:UP000001645};
KW   Ion transport {ECO:0000256|SAAS:SAAS00502700};
KW   Membrane {ECO:0000256|SAAS:SAAS00502630, ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001645};
KW   Transmembrane {ECO:0000256|SAAS:SAAS00137614,
KW   ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAAS:SAAS00137754,
KW   ECO:0000256|SAM:Phobius}; Transport {ECO:0000256|SAAS:SAAS00502637}.
FT   TRANSMEM    118    138       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    150    170       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    256    274       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    328    350       Helical. {ECO:0000256|SAM:Phobius}.
FT   DOMAIN      432    538       Cyclic nucleotide-binding.
FT                                {ECO:0000259|PROSITE:PS50042}.
FT   COILED       55    106       {ECO:0000256|SAM:Coils}.
FT   COILED      587    618       {ECO:0000256|SAM:Coils}.
SQ   SEQUENCE   646 AA;  74808 MW;  4A8CD4540CD5B0A2 CRC64;
     MKVGVIETHH SHAIIPSVVV QDTSEDPGLT EKGENRCARK WYLPGAFAQY NINNNSNKDE
     EKKKKKEKKS KSENKKDGER QKNKEKKEKH KNKDKKKKEK DEEKKKDIFI IDPAGNIYYN
     WLFCITMPVM YNWTMIIARA CFDELQNDYL AVWFIVDYVS DVIYIADMFV RTRTGYLEQG
     LLVKEEQKLK EKYKSSLQFK LDFLSIIPTD LLYFKLGLNY PELRVNRLLR VARMFEFFQR
     TETRTNYPNI FRISNLVMYI VIIIHWNACV YYSISKAIGF GADTWVYPNT SHPEFARLTR
     KYVYSLYWST LTLTTIGETP PPVQDSEYFF VVVDFLVGVL IFATIVGNVG SMISNMNAAR
     AEFQAKIDAI KQYMHFRNVS KDMEKRVIKW FDYLWTNKKA VDEREVLKYL PDKLRAEIAI
     NVHLETLKKV RIFADCEAGL LVELVLKLQP QVYSPGDYIC RKGDIGREMY IIKEGKLAVV
     ADDGVTQFVV LSDGSYFGEI SILNIKGSKA GNRRTANIRS IGYSDLFCLS KDDLMEALTE
     YPDAKAMLEE KGKQILMKDG LLDIEVANLG SDPKDLEEKV AYMEGTMDRL QTKFARLLAE
     YDAAQQKLKK RLTQIEKILK PVIEQEFLDF EEADPSTDKP GVTKTE
//
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