GenomeNet

Database: UniProt
Entry: G1T1V6_RABIT
LinkDB: G1T1V6_RABIT
Original site: G1T1V6_RABIT 
ID   G1T1V6_RABIT            Unreviewed;       328 AA.
AC   G1T1V6;
DT   19-OCT-2011, integrated into UniProtKB/TrEMBL.
DT   11-DEC-2019, sequence version 2.
DT   24-JAN-2024, entry version 69.
DE   SubName: Full=C1q and TNF related 2 {ECO:0000313|Ensembl:ENSOCUP00000010092.3};
GN   Name=C1QTNF2 {ECO:0000313|Ensembl:ENSOCUP00000010092.3};
OS   Oryctolagus cuniculus (Rabbit).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus.
OX   NCBI_TaxID=9986 {ECO:0000313|Ensembl:ENSOCUP00000010092.3, ECO:0000313|Proteomes:UP000001811};
RN   [1] {ECO:0000313|Ensembl:ENSOCUP00000010092.3, ECO:0000313|Proteomes:UP000001811}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Thorbecke inbred {ECO:0000313|Ensembl:ENSOCUP00000010092.3,
RC   ECO:0000313|Proteomes:UP000001811};
RX   PubMed=21993624; DOI=10.1038/nature10530;
RA   Lindblad-Toh K., Garber M., Zuk O., Lin M.F., Parker B.J., Washietl S.,
RA   Kheradpour P., Ernst J., Jordan G., Mauceli E., Ward L.D., Lowe C.B.,
RA   Holloway A.K., Clamp M., Gnerre S., Alfoldi J., Beal K., Chang J.,
RA   Clawson H., Cuff J., Di Palma F., Fitzgerald S., Flicek P., Guttman M.,
RA   Hubisz M.J., Jaffe D.B., Jungreis I., Kent W.J., Kostka D., Lara M.,
RA   Martins A.L., Massingham T., Moltke I., Raney B.J., Rasmussen M.D.,
RA   Robinson J., Stark A., Vilella A.J., Wen J., Xie X., Zody M.C., Baldwin J.,
RA   Bloom T., Chin C.W., Heiman D., Nicol R., Nusbaum C., Young S.,
RA   Wilkinson J., Worley K.C., Kovar C.L., Muzny D.M., Gibbs R.A., Cree A.,
RA   Dihn H.H., Fowler G., Jhangiani S., Joshi V., Lee S., Lewis L.R.,
RA   Nazareth L.V., Okwuonu G., Santibanez J., Warren W.C., Mardis E.R.,
RA   Weinstock G.M., Wilson R.K., Delehaunty K., Dooling D., Fronik C.,
RA   Fulton L., Fulton B., Graves T., Minx P., Sodergren E., Birney E.,
RA   Margulies E.H., Herrero J., Green E.D., Haussler D., Siepel A., Goldman N.,
RA   Pollard K.S., Pedersen J.S., Lander E.S., Kellis M.;
RT   "A high-resolution map of human evolutionary constraint using 29 mammals.";
RL   Nature 478:476-482(2011).
RN   [2] {ECO:0000313|Ensembl:ENSOCUP00000010092.3}
RP   IDENTIFICATION.
RC   STRAIN=Thorbecke {ECO:0000313|Ensembl:ENSOCUP00000010092.3};
RG   Ensembl;
RL   Submitted (JUL-2023) to UniProtKB.
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DR   EMBL; AAGW02027205; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   AlphaFoldDB; G1T1V6; -.
DR   SMR; G1T1V6; -.
DR   STRING; 9986.ENSOCUP00000010092; -.
DR   PaxDb; 9986-ENSOCUP00000010092; -.
DR   Ensembl; ENSOCUT00000011738.4; ENSOCUP00000010092.3; ENSOCUG00000011735.4.
DR   eggNOG; ENOG502QT1U; Eukaryota.
DR   GeneTree; ENSGT00940000159591; -.
DR   HOGENOM; CLU_001074_0_3_1; -.
DR   InParanoid; G1T1V6; -.
DR   TreeFam; TF329591; -.
DR   Proteomes; UP000001811; Chromosome 3.
DR   Bgee; ENSOCUG00000011735; Expressed in aorta and 16 other cell types or tissues.
DR   GO; GO:0005576; C:extracellular region; IEA:UniProtKB-KW.
DR   Gene3D; 2.60.120.40; -; 1.
DR   InterPro; IPR001073; C1q_dom.
DR   InterPro; IPR008160; Collagen.
DR   InterPro; IPR008983; Tumour_necrosis_fac-like_dom.
DR   PANTHER; PTHR15427:SF28; COMPLEMENT C1Q TUMOR NECROSIS FACTOR-RELATED PROTEIN 2; 1.
DR   PANTHER; PTHR15427; EMILIN ELASTIN MICROFIBRIL INTERFACE-LOCATED PROTEIN ELASTIN MICROFIBRIL INTERFACER; 1.
DR   Pfam; PF00386; C1q; 1.
DR   Pfam; PF01391; Collagen; 2.
DR   PRINTS; PR00007; COMPLEMNTC1Q.
DR   SMART; SM00110; C1Q; 1.
DR   SUPFAM; SSF49842; TNF-like; 1.
DR   PROSITE; PS50871; C1Q; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000001811};
KW   Secreted {ECO:0000256|ARBA:ARBA00022525};
KW   Signal {ECO:0000256|ARBA:ARBA00022729}.
FT   DOMAIN          188..324
FT                   /note="C1q"
FT                   /evidence="ECO:0000259|PROSITE:PS50871"
FT   REGION          76..190
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        81..95
FT                   /note="Pro residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   328 AA;  34061 MW;  3F1ECC0B0718214D CRC64;
     MGKLCLGPAS GLAAEGGGDA EHGGALPRSG RPWTWPAAAR VATMIPWVLL ACAFPCAADP
     LLGAFARRDF QKGSPQLVCS LPGPQGPPGP PGAPGPSGMV GRMGFPGKDG QDGQDGDRGD
     SGEEGPPGRT GNRGKPGPKG KAGAIGRAGP RGPKGVSGAP GKHGTPGKKG PKGKKGEPGL
     PGPCSCGSGR AKSAFSVAVT KSYPRERLPI KFDKILMNEG GHYNASSGKF VCSVPGIYYF
     TYDITLANKH LAIGLVHNGQ YRIRTFDANT GNHDVASGST ILALKQGDEV WLQIFYSEQN
     GLFYDPYWTD SLFTGFLIYA DQDNPNEV
//
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