ID G1VXB3_9FIRM Unreviewed; 405 AA.
AC G1VXB3;
DT 16-NOV-2011, integrated into UniProtKB/TrEMBL.
DT 16-NOV-2011, sequence version 1.
DT 24-JAN-2024, entry version 40.
DE SubName: Full=RNA polymerase sigma-54 factor {ECO:0000313|EMBL:EGX69728.1};
GN ORFNames=HMPREF9022_04644 {ECO:0000313|EMBL:EGX69728.1};
OS Erysipelotrichaceae bacterium 2_2_44A.
OC Bacteria; Bacillota; Erysipelotrichia; Erysipelotrichales;
OC Erysipelotrichaceae.
OX NCBI_TaxID=457422 {ECO:0000313|EMBL:EGX69728.1, ECO:0000313|Proteomes:UP000003043};
RN [1] {ECO:0000313|EMBL:EGX69728.1, ECO:0000313|Proteomes:UP000003043}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=2_2_44A {ECO:0000313|EMBL:EGX69728.1,
RC ECO:0000313|Proteomes:UP000003043};
RG The Broad Institute Genome Sequencing Platform;
RA Earl A., Ward D., Feldgarden M., Gevers D., Daigneault M., Strauss J.,
RA Ambrose C.E., Allen-Vercoe E., Young S.K., Zeng Q., Gargeya S.,
RA Fitzgerald M., Haas B., Abouelleil A., Alvarado L., Arachchi H.M.,
RA Berlin A., Brown A., Chapman S.B., Chen Z., Dunbar C., Freedman E.,
RA Gearin G., Gellesch M., Goldberg J., Griggs A., Gujja S., Heiman D.,
RA Howarth C., Larson L., Lui A., MacDonald P.J.P., Mehta T., Montmayeur A.,
RA Murphy C., Neiman D., Pearson M., Priest M., Roberts A., Saif S., Shea T.,
RA Shenoy N., Sisk P., Stolte C., Sykes S., Wortman J., Nusbaum C., Birren B.;
RT "The Genome Sequence of Erysipelotrichaceae bacterium 2_2_44A.";
RL Submitted (JUN-2011) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the sigma-54 factor family.
CC {ECO:0000256|ARBA:ARBA00008798}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EGX69728.1}.
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DR EMBL; ADCZ01000055; EGX69728.1; -; Genomic_DNA.
DR AlphaFoldDB; G1VXB3; -.
DR PATRIC; fig|457422.3.peg.4876; -.
DR HOGENOM; CLU_020569_1_0_9; -.
DR OrthoDB; 9814402at2; -.
DR BioCyc; EBAC457422-HMP:GMFD-4691-MONOMER; -.
DR Proteomes; UP000003043; Unassembled WGS sequence.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0001216; F:DNA-binding transcription activator activity; IEA:InterPro.
DR GO; GO:0016779; F:nucleotidyltransferase activity; IEA:UniProtKB-KW.
DR GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 1.10.10.1330; RNA polymerase sigma-54 factor, core-binding domain; 1.
DR InterPro; IPR000394; RNA_pol_sigma_54.
DR InterPro; IPR007046; RNA_pol_sigma_54_core-bd.
DR InterPro; IPR007634; RNA_pol_sigma_54_DNA-bd.
DR InterPro; IPR038709; RpoN_core-bd_sf.
DR NCBIfam; TIGR02395; rpoN_sigma; 1.
DR PANTHER; PTHR32248; RNA POLYMERASE SIGMA-54 FACTOR; 1.
DR PANTHER; PTHR32248:SF4; RNA POLYMERASE SIGMA-54 FACTOR; 1.
DR Pfam; PF00309; Sigma54_AID; 1.
DR Pfam; PF04963; Sigma54_CBD; 1.
DR Pfam; PF04552; Sigma54_DBD; 1.
DR PIRSF; PIRSF000774; RpoN; 2.
DR PRINTS; PR00045; SIGMA54FCT.
DR PROSITE; PS00718; SIGMA54_2; 1.
DR PROSITE; PS50044; SIGMA54_3; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478};
KW Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW Sigma factor {ECO:0000256|ARBA:ARBA00023082};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015};
KW Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT DOMAIN 65..230
FT /note="RNA polymerase sigma factor 54 core-binding"
FT /evidence="ECO:0000259|Pfam:PF04963"
FT DOMAIN 252..403
FT /note="RNA polymerase sigma factor 54 DNA-binding"
FT /evidence="ECO:0000259|Pfam:PF04552"
SQ SEQUENCE 405 AA; 46264 MW; 1364B95A7B1321EE CRC64;
MTQFLQQNQT MKQTHILTHK NQQALKILKM DSRELLELIS ECVQQNPFLD FHPSAQGDDY
LLQNAIQRPS LQEDLYMQLH TLREPYDEAI CAYLIESLDE HGFLSGSVSA YCEDLQIDEE
TLLGQLRILQ GFEPCGVAAR SIREALILQC RKTRNTMGEQ ILSEYAQELA EGDLAAIAGG
MQLSVREVKE VIASLRTCNP DPCAAYAKEH VETILPEVEI CVQDQQLQIV PMRYGATLVQ
EQYVQAIEQN EQLKAYFREA NLLFETLNRR NATLLLIMNE LVSIQKHHFL FGDELQSCTL
QQLADQLGLH VSTVSRALQH KYYLFHGECY PIRSLLCTAT AQGDSSDAVQ RAITEILRHE
DPSHPFSDQQ LVIKLRTMDI SVSRRTVTKY RKLLHIPSST HRKHT
//
