ID G2HIV6_PANTR Unreviewed; 415 AA.
AC G2HIV6; A0A2J8JDK9;
DT 16-NOV-2011, integrated into UniProtKB/TrEMBL.
DT 16-NOV-2011, sequence version 1.
DT 24-JAN-2024, entry version 78.
DE SubName: Full=Heterogeneous nuclear ribonucleoprotein F {ECO:0000313|EMBL:BAK63664.1};
DE SubName: Full=Heteroous nuclear ribonucleoprotein F {ECO:0000313|Ensembl:ENSPTRP00000050686.3};
GN Name=HNRNPF {ECO:0000313|EMBL:JAA18967.1,
GN ECO:0000313|Ensembl:ENSPTRP00000050686.3, ECO:0000313|VGNC:VGNC:4712};
OS Pan troglodytes (Chimpanzee).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Pan.
OX NCBI_TaxID=9598 {ECO:0000313|EMBL:BAK63664.1};
RN [1] {ECO:0000313|Ensembl:ENSPTRP00000050686.3, ECO:0000313|Proteomes:UP000002277}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=16136131; DOI=10.1038/nature04072;
RG Chimpanzee sequencing and analysis consortium;
RT "Initial sequence of the chimpanzee genome and comparison with the human
RT genome.";
RL Nature 437:69-87(2005).
RN [2] {ECO:0000313|EMBL:BAK63664.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Testis {ECO:0000313|EMBL:BAK63664.1};
RX PubMed=21484476; DOI=10.1007/s10142-011-0220-9;
RA Kim R.N., Kim D.W., Choi S.H., Chae S.H., Nam S.H., Kim D.W., Kim A.,
RA Kang A., Park K.H., Lee Y.S., Hirai M., Suzuki Y., Sugano S., Hashimoto K.,
RA Kim D.S., Park H.S.;
RT "Major chimpanzee-specific structural changes in sperm development-
RT associated genes.";
RL Funct. Integr. Genomics 11:507-517(2011).
RN [3] {ECO:0000313|EMBL:JAA18967.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Skeletal muscle {ECO:0000313|EMBL:JAA39376.1}, Skin
RC {ECO:0000313|EMBL:JAA28387.1}, and Smooth vascular
RC {ECO:0000313|EMBL:JAA18967.1};
RA Maudhoo M.D., Meehan D.T., Norgren R.B.Jr.;
RT "De novo assembly of the reference chimpanzee transcriptome from NextGen
RT mRNA sequences.";
RL Submitted (OCT-2012) to the EMBL/GenBank/DDBJ databases.
RN [4] {ECO:0000313|Ensembl:ENSPTRP00000050686.3}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (JUL-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleoplasm
CC {ECO:0000256|ARBA:ARBA00004642}.
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DR EMBL; AACZ04049692; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AK306670; BAK63664.1; -; mRNA.
DR EMBL; GABF01003178; JAA18967.1; -; mRNA.
DR EMBL; GABF01003177; JAA18968.1; -; mRNA.
DR EMBL; GABF01003176; JAA18969.1; -; mRNA.
DR EMBL; GABF01003175; JAA18970.1; -; mRNA.
DR EMBL; GABD01004713; JAA28387.1; -; mRNA.
DR EMBL; GABD01004712; JAA28388.1; -; mRNA.
DR EMBL; GABD01004711; JAA28389.1; -; mRNA.
DR EMBL; GABD01004710; JAA28390.1; -; mRNA.
DR EMBL; GABD01004709; JAA28391.1; -; mRNA.
DR EMBL; GABE01005363; JAA39376.1; -; mRNA.
DR EMBL; GABE01005362; JAA39377.1; -; mRNA.
DR EMBL; GABE01005361; JAA39378.1; -; mRNA.
DR EMBL; GABE01005360; JAA39379.1; -; mRNA.
DR EMBL; GABE01005359; JAA39380.1; -; mRNA.
DR EMBL; GABE01005358; JAA39381.1; -; mRNA.
DR RefSeq; NP_001233466.1; NM_001246537.1.
DR RefSeq; XP_016817914.1; XM_016962425.1.
DR RefSeq; XP_016817915.1; XM_016962426.1.
DR RefSeq; XP_016817916.1; XM_016962427.1.
DR RefSeq; XP_016817917.1; XM_016962428.1.
DR RefSeq; XP_016817918.1; XM_016962429.1.
DR RefSeq; XP_016817920.1; XM_016962431.1.
DR RefSeq; XP_016817921.1; XM_016962432.1.
DR SMR; G2HIV6; -.
DR STRING; 9598.ENSPTRP00000050686; -.
DR PaxDb; 9598-ENSPTRP00000050686; -.
DR Ensembl; ENSPTRT00000004547.6; ENSPTRP00000050686.3; ENSPTRG00000002446.6.
DR GeneID; 466053; -.
DR KEGG; ptr:466053; -.
DR CTD; 3185; -.
DR VGNC; VGNC:4712; HNRNPF.
DR eggNOG; KOG4211; Eukaryota.
DR GeneTree; ENSGT00940000157838; -.
DR HOGENOM; CLU_032003_1_0_1; -.
DR OMA; ATEMDWA; -.
DR OrthoDB; 314723at2759; -.
DR TreeFam; TF316157; -.
DR Proteomes; UP000002277; Chromosome 10.
DR Bgee; ENSPTRG00000002446; Expressed in fibroblast and 21 other cell types or tissues.
DR GO; GO:0071013; C:catalytic step 2 spliceosome; IEA:Ensembl.
DR GO; GO:0005829; C:cytosol; IEA:Ensembl.
DR GO; GO:0005654; C:nucleoplasm; IBA:GO_Central.
DR GO; GO:1990904; C:ribonucleoprotein complex; IBA:GO_Central.
DR GO; GO:0045202; C:synapse; IEA:Ensembl.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0003727; F:single-stranded RNA binding; IEA:Ensembl.
DR GO; GO:0043484; P:regulation of RNA splicing; IBA:GO_Central.
DR CDD; cd12729; RRM1_hnRNPH_hnRNPH2_hnRNPF; 1.
DR CDD; cd12731; RRM2_hnRNPH_hnRNPH2_hnRNPF; 1.
DR CDD; cd12506; RRM3_hnRNPH_CRSF1_like; 1.
DR Gene3D; 3.30.70.330; -; 3.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR InterPro; IPR012996; Znf_CHHC.
DR PANTHER; PTHR13976:SF32; HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN F; 1.
DR PANTHER; PTHR13976; HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN-RELATED; 1.
DR Pfam; PF00076; RRM_1; 2.
DR Pfam; PF08080; zf-RNPHF; 1.
DR SMART; SM00360; RRM; 3.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 3.
DR PROSITE; PS50102; RRM; 2.
PE 2: Evidence at transcript level;
KW Acetylation {ECO:0000256|ARBA:ARBA00022990};
KW Isopeptide bond {ECO:0000256|ARBA:ARBA00022499};
KW Reference proteome {ECO:0000313|Proteomes:UP000002277};
KW Ribonucleoprotein {ECO:0000313|EMBL:BAK63664.1};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176};
KW Ubl conjugation {ECO:0000256|ARBA:ARBA00022843}.
FT DOMAIN 111..188
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 289..366
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
SQ SEQUENCE 415 AA; 45672 MW; D14E170631FB1F31 CRC64;
MMLGPEGGEG FVVKLRGLPW SCSVEDVQNF LSDCTIHDGA AGVHFIYTRE GRQSGEAFVE
LGSEDDVKMA LKKDRESMGH RYIEVFKSHR TEMDWVLKHS GPNSADSAND GFVRLRGLPF
GCTKEEIVQF FSGLEIVPNG ITLPVDPEGK ITGEAFVQFA SQELAEKALG KHKERIGHRY
IEVFKSSQEE VRSYSDPPLK FMSVQRPGPY DRPGTARRYI GIVKQAGLER MRPGAYSTGY
GGYEEYSGLS DGYGFTTDLF GRDLSYCLSG MYDHRYGDSE FTVQSTTGHC VHMRGLPYKA
TENDIYNFFS PLNPVRVHIE IGPDGRVTGE ADVEFATHEE AVAAMSKDRA NMQHRYIELF
LNSTTGASNG AYSSQVMQGM GVSAAQATYS GLESQSVSGC YGAGYSGQNS MGGYD
//