ID G3JTM1_CORMM Unreviewed; 353 AA.
AC G3JTM1;
DT 16-NOV-2011, integrated into UniProtKB/TrEMBL.
DT 16-NOV-2011, sequence version 1.
DT 27-MAR-2024, entry version 51.
DE SubName: Full=Exosome component 2 {ECO:0000313|EMBL:EGX88025.1};
GN ORFNames=CCM_09161 {ECO:0000313|EMBL:EGX88025.1};
OS Cordyceps militaris (strain CM01) (Caterpillar fungus).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes;
OC Hypocreomycetidae; Hypocreales; Cordycipitaceae; Cordyceps.
OX NCBI_TaxID=983644 {ECO:0000313|EMBL:EGX88025.1, ECO:0000313|Proteomes:UP000001610};
RN [1] {ECO:0000313|EMBL:EGX88025.1, ECO:0000313|Proteomes:UP000001610}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CM01 {ECO:0000313|EMBL:EGX88025.1,
RC ECO:0000313|Proteomes:UP000001610};
RX PubMed=22112802; DOI=10.1186/gb-2011-12-11-r116;
RA Zheng P., Xia Y., Xiao G., Xiong C., Hu X., Zhang S., Zheng H., Huang Y.,
RA Zhou Y., Wang S., Zhao G.P., Liu X., St Leger R.J., Wang C.;
RT "Genome sequence of the insect pathogenic fungus Cordyceps militaris, a
RT valued traditional Chinese medicine.";
RL Genome Biol. 12:RESEARCH116.1-RESEARCH116.21(2011).
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DR EMBL; JH126406; EGX88025.1; -; Genomic_DNA.
DR RefSeq; XP_006674358.1; XM_006674295.1.
DR AlphaFoldDB; G3JTM1; -.
DR STRING; 983644.G3JTM1; -.
DR GeneID; 18171164; -.
DR KEGG; cmt:CCM_09161; -.
DR VEuPathDB; FungiDB:CCM_09161; -.
DR eggNOG; KOG3013; Eukaryota.
DR HOGENOM; CLU_034114_0_0_1; -.
DR InParanoid; G3JTM1; -.
DR OMA; GVNGFIW; -.
DR OrthoDB; 5472588at2759; -.
DR Proteomes; UP000001610; Unassembled WGS sequence.
DR GO; GO:0000178; C:exosome (RNase complex); IEA:UniProtKB-KW.
DR GO; GO:0005634; C:nucleus; IEA:UniProt.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR CDD; cd05789; S1_Rrp4; 1.
DR Gene3D; 2.40.50.100; -; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR InterPro; IPR025721; Exosome_cplx_N_dom.
DR InterPro; IPR026699; Exosome_RNA_bind1/RRP40/RRP4.
DR InterPro; IPR036612; KH_dom_type_1_sf.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR048565; RRP4_S1.
DR PANTHER; PTHR21321:SF4; EXOSOME COMPLEX COMPONENT RRP4; 1.
DR PANTHER; PTHR21321; PNAS-3 RELATED; 1.
DR Pfam; PF14382; ECR1_N; 1.
DR Pfam; PF21266; RRP4_S1; 1.
DR SUPFAM; SSF54791; Eukaryotic type KH-domain (KH-domain type I); 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR SUPFAM; SSF110324; Ribosomal L27 protein-like; 1.
PE 4: Predicted;
KW Exosome {ECO:0000256|ARBA:ARBA00022835};
KW Reference proteome {ECO:0000313|Proteomes:UP000001610};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884};
KW rRNA processing {ECO:0000256|ARBA:ARBA00022552}.
FT DOMAIN 61..98
FT /note="Exosome complex component N-terminal"
FT /evidence="ECO:0000259|Pfam:PF14382"
FT DOMAIN 111..183
FT /note="RRP4 S1"
FT /evidence="ECO:0000259|Pfam:PF21266"
FT REGION 1..38
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 353 AA; 38022 MW; 3564364F8B045A5F CRC64;
MPITILRPQP AAQQRPAAAL DSDYDSSDSD GGVDVQGDVS MRAAKRQRTM ADDDAEADEI
LTPGTLITSN PQWMRGHGTY VPQGSTSITS SLAGTLTKTN KLLSVRPLRA RYTPEIGDLV
VGRIVEVQAK RWRVDVAAAQ LAILQISAIN LPGGILRKRT ETDELQIRTF FAEGDLVVAE
VQQLHQDGAA SLHTRSLKYG KLRNGVFVRV GGTGGGGGVV RAKRQVWTME PAATAAAAHK
MDVLLGVNGY IWISRHVASE APAEAAGVNR MEEAVSSRVY ASQNDDVDVA TMREIARVRS
VVLALVEAGL RVDEDTVTRG YHEAVELGRE TPEDELYLGG ERGRRFAAVM AGV
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