ID G3LIM1_9PSED Unreviewed; 195 AA.
AC G3LIM1;
DT 16-NOV-2011, integrated into UniProtKB/TrEMBL.
DT 16-NOV-2011, sequence version 1.
DT 24-JAN-2024, entry version 25.
DE SubName: Full=RNA polymerase subunit D {ECO:0000313|EMBL:AEN02722.1};
DE Flags: Fragment;
GN Name=rpoD {ECO:0000313|EMBL:AEN02722.1};
OS Pseudomonas sp. RW09-C16.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas.
OX NCBI_TaxID=1078364 {ECO:0000313|EMBL:AEN02722.1};
RN [1] {ECO:0000313|EMBL:AEN02722.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=RW09-C16 {ECO:0000313|EMBL:AEN02722.1};
RX PubMed=21856827; DOI=10.1128/AEM.05434-11;
RA Meyer J.B., Frapolli M., Keel C., Maurhofer M.;
RT "Pyrroloquinoline Quinone Biosynthesis Gene pqqC, a Novel Molecular Marker
RT for Studying the Phylogeny and Diversity of Phosphate-Solubilizing
RT Pseudomonads.";
RL Appl. Environ. Microbiol. 77:7345-7354(2011).
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DR EMBL; JN397590; AEN02722.1; -; Genomic_DNA.
DR AlphaFoldDB; G3LIM1; -.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0016987; F:sigma factor activity; IEA:InterPro.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR Gene3D; 1.10.601.10; RNA Polymerase Primary Sigma Factor; 1.
DR InterPro; IPR007631; RNA_pol_sigma_70_non-ess.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR Pfam; PF04546; Sigma70_ner; 1.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
PE 4: Predicted;
FT DOMAIN 3..195
FT /note="RNA polymerase sigma factor 70 non-essential"
FT /evidence="ECO:0000259|Pfam:PF04546"
FT REGION 1..62
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 40..59
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:AEN02722.1"
FT NON_TER 195
FT /evidence="ECO:0000313|EMBL:AEN02722.1"
SQ SEQUENCE 195 AA; 21291 MW; 1163C9CC4E595D30 CRC64;
EGGRLSDVLS GYIDPDDGIA PPAAEVPPPV DAKAAKADDD SEDDDAEASG DDEDEVESGP
DPIIAAQRFG AVSDQMEITR KALKKHGRGN KQAIAELLAL AELFMPIKLV PKQFEGLVER
VRSALERLRA QERAIMQLCV RDARMPRADF LRQFPGNEVD ESWTDALAKG KAKYAEAIGR
LQPDIIRCQQ KLTAL
//