ID G3PK33_GASAC Unreviewed; 557 AA.
AC G3PK33;
DT 16-NOV-2011, integrated into UniProtKB/TrEMBL.
DT 16-NOV-2011, sequence version 1.
DT 27-MAR-2024, entry version 63.
DE SubName: Full=Polypyrimidine tract binding protein 1b {ECO:0000313|Ensembl:ENSGACP00000017963.1};
OS Gasterosteus aculeatus (Three-spined stickleback).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC Eupercaria; Perciformes; Cottioidei; Gasterosteales; Gasterosteidae;
OC Gasterosteus.
OX NCBI_TaxID=69293 {ECO:0000313|Ensembl:ENSGACP00000017963.1, ECO:0000313|Proteomes:UP000007635};
RN [1] {ECO:0000313|Ensembl:ENSGACP00000017963.1, ECO:0000313|Proteomes:UP000007635}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA Lindblad-Toh K., Mauceli E., Grabherr M., Chang J.L., Lander E.S.;
RL Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSGACP00000017963.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
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DR AlphaFoldDB; G3PK33; -.
DR STRING; 69293.ENSGACP00000017963; -.
DR Ensembl; ENSGACT00000017998.1; ENSGACP00000017963.1; ENSGACG00000013587.1.
DR eggNOG; KOG1190; Eukaryota.
DR GeneTree; ENSGT01050000244924; -.
DR InParanoid; G3PK33; -.
DR OMA; AVPCCAM; -.
DR TreeFam; TF319824; -.
DR Proteomes; UP000007635; Unassembled WGS sequence.
DR Bgee; ENSGACG00000013587; Expressed in pharyngeal gill and 13 other cell types or tissues.
DR GO; GO:0005634; C:nucleus; IEA:InterPro.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006397; P:mRNA processing; IEA:InterPro.
DR CDD; cd12693; RRM2_PTBP1_like; 1.
DR Gene3D; 3.30.70.330; -; 4.
DR InterPro; IPR006536; HnRNP-L/PTB.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR021790; PTBP1-like_RRM2.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR NCBIfam; TIGR01649; hnRNP-L_PTB; 1.
DR PANTHER; PTHR15592; MATRIN 3/NUCLEAR PROTEIN 220-RELATED; 1.
DR PANTHER; PTHR15592:SF19; POLYPYRIMIDINE TRACT-BINDING PROTEIN 1; 1.
DR Pfam; PF13893; RRM_5; 2.
DR Pfam; PF11835; RRM_8; 1.
DR SMART; SM00360; RRM; 4.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 4.
DR PROSITE; PS50102; RRM; 3.
PE 4: Predicted;
KW Acetylation {ECO:0000256|ARBA:ARBA00022990};
KW Activator {ECO:0000256|ARBA:ARBA00023159};
KW Reference proteome {ECO:0000313|Proteomes:UP000007635};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU00176}; Ubl conjugation {ECO:0000256|ARBA:ARBA00022843}.
FT DOMAIN 73..157
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 184..260
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 362..436
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 435..454
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 557 AA; 60731 MW; 520E1230E84D7AA2 CRC64;
SLEAELIFLP AASNTLSSLH SSVHQDLTVG TKRGSEETFP SVSIGPYIMS TTANGNDSKK
FKGDIRGPGV PSRVIHIRKL PNDISEAEVI SLGLPFGDIT NLLMLKAKNQ AFLEMNSEEA
AQNMVGYYST VMPIIRNHLV YVQFSNHKEL KTDNSPNQER AQAALRALTS SHVDPTMVAP
SAVLRVVVEN LVYPVTLDAL CQIFSKFGTV LRIIVFTKNS QFQALLQYAE GASAQSAKLS
LDAQNIYNGC CTLRISFSKL TTLNVKYNNE KSRDFTRPDL PSGDSQPSME HPAMATAFTA
PGIISAGPYG GAAHGFQPAF TLQPAMSSHY PGLVPAMPGA LASLSLPGAA RLGFHHMSAG
VSVLLVSNLN PERVTPHCLF ILFGVYGDVM RVKILFNKKE NALVQMSDCT QAQLAMSHLS
GQQLHGKSLR ITPSKHTSVQ LPREGHEDQG LTKDYSNSPL HRFKKPGSQN YSNIFPPSAT
LHLSNIPPVW CGRTTLRCCS PPPGAMVKAF KFFQKDHKMA LIQMGSVEEA LEALIEFHNH
DLGENHHLRV SFSKSSI
//
