ID G3U672_LOXAF Unreviewed; 888 AA.
AC G3U672;
DT 16-NOV-2011, integrated into UniProtKB/TrEMBL.
DT 16-NOV-2011, sequence version 1.
DT 08-NOV-2023, entry version 59.
DE SubName: Full=SLIT and NTRK like family member 3 {ECO:0000313|Ensembl:ENSLAFP00000023330.1};
GN Name=SLITRK3 {ECO:0000313|Ensembl:ENSLAFP00000023330.1};
OS Loxodonta africana (African elephant).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta.
OX NCBI_TaxID=9785 {ECO:0000313|Ensembl:ENSLAFP00000023330.1, ECO:0000313|Proteomes:UP000007646};
RN [1] {ECO:0000313|Ensembl:ENSLAFP00000023330.1, ECO:0000313|Proteomes:UP000007646}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Isolate ISIS603380 {ECO:0000313|Ensembl:ENSLAFP00000023330.1,
RC ECO:0000313|Proteomes:UP000007646};
RA Di Palma F., Heiman D., Young S., Johnson J., Lander E.S., Lindblad-Toh K.;
RT "The Genome Sequence of Loxodonta africana (African elephant).";
RL Submitted (JUN-2009) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSLAFP00000023330.1}
RP IDENTIFICATION.
RC STRAIN=Isolate ISIS603380 {ECO:0000313|Ensembl:ENSLAFP00000023330.1};
RG Ensembl;
RL Submitted (JUL-2023) to UniProtKB.
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DR AlphaFoldDB; G3U672; -.
DR STRING; 9785.ENSLAFP00000023330; -.
DR Ensembl; ENSLAFT00000000382.4; ENSLAFP00000023330.1; ENSLAFG00000000382.4.
DR eggNOG; ENOG502QYY5; Eukaryota.
DR GeneTree; ENSGT00940000158681; -.
DR HOGENOM; CLU_012706_0_0_1; -.
DR InParanoid; G3U672; -.
DR OMA; TLHKGRM; -.
DR TreeFam; TF351826; -.
DR Proteomes; UP000007646; Unassembled WGS sequence.
DR GO; GO:0009986; C:cell surface; IEA:Ensembl.
DR GO; GO:0098982; C:GABA-ergic synapse; IEA:Ensembl.
DR GO; GO:0099634; C:postsynaptic specialization membrane; IEA:Ensembl.
DR GO; GO:0007409; P:axonogenesis; IEA:Ensembl.
DR GO; GO:0097116; P:gephyrin clustering involved in postsynaptic density assembly; IEA:Ensembl.
DR GO; GO:0072578; P:neurotransmitter-gated ion channel clustering; IEA:Ensembl.
DR GO; GO:0051965; P:positive regulation of synapse assembly; IEA:Ensembl.
DR GO; GO:1905606; P:regulation of presynapse assembly; IEA:Ensembl.
DR GO; GO:0099560; P:synaptic membrane adhesion; IEA:Ensembl.
DR GO; GO:0051932; P:synaptic transmission, GABAergic; IEA:Ensembl.
DR GO; GO:0072553; P:terminal button organization; IEA:Ensembl.
DR Gene3D; 3.80.10.10; Ribonuclease Inhibitor; 2.
DR InterPro; IPR000483; Cys-rich_flank_reg_C.
DR InterPro; IPR001611; Leu-rich_rpt.
DR InterPro; IPR003591; Leu-rich_rpt_typical-subtyp.
DR InterPro; IPR032675; LRR_dom_sf.
DR InterPro; IPR043326; Slitrk.
DR PANTHER; PTHR45773:SF6; SLIT AND NTRK-LIKE PROTEIN 3; 1.
DR PANTHER; PTHR45773; SLIT AND NTRK-LIKE PROTEIN 4-RELATED; 1.
DR Pfam; PF13855; LRR_8; 2.
DR SMART; SM00369; LRR_TYP; 9.
DR SMART; SM00082; LRRCT; 2.
DR SUPFAM; SSF52058; L domain-like; 2.
PE 4: Predicted;
KW Leucine-rich repeat {ECO:0000256|ARBA:ARBA00022614};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000007646};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Signal {ECO:0000256|ARBA:ARBA00022729};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 661..685
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 238..288
FT /note="LRRCT"
FT /evidence="ECO:0000259|SMART:SM00082"
FT DOMAIN 568..618
FT /note="LRRCT"
FT /evidence="ECO:0000259|SMART:SM00082"
FT REGION 331..366
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 626..645
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 760..779
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 343..366
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 888 AA; 100107 MW; 8AC17D9C7D3AFCF3 CRC64;
VRMICPFPTS IAETLHRGRM LWIILLSTVA LGWTTPIPLI EDSEEIDEPC FDPCYCEVKE
SLFHIHCDSK GFTNISQITE FWSRPFKLYL QRNSMRKLYT NSFLHLNNAV SINLGNNALQ
DIQTGAFNGL KMLKRLYLHE NKLDVFRNDT FLGLESLEYL QADYNVIKRI ESGAFRNLSK
LRVLILNDNL IPMLPTNLFK AVSLTHLDLR GNRLKVLFYR GMLDHIGRSL MELQLEENPW
NCTCEIVQLK SWLERIPYTA LVGDITCETP FHFHGKDLRE IRKTELCPLL SDSEVEASLG
IPHLSSSKEN AWPTKPSSML SSVHFTASSV EYKSSNKQPK PTKQPRTPRP PSTSQALYPG
PNQPPIAPYQ TRPPIPIICP TGCTCNLHIN DLGLTVNCKE RGFNNISELL PRPLNAKKLY
LSSNLIQKIY RSDFWNFSSL DLLHLGNNRI SYVQDGAFIN LPNLKSLFLN GNDIEKLTPG
MFRGLQSLHY LYFEFNIIRE IQPAAFSLMP NLKLLFLNNN LLRTLPTDAF AGTSLARLNL
RKNYFLYLPV AGVLEHLNAI VQIDLNENPW DCTCDLVPFK QWIETISSVS VVGDVLCGSP
ENLTHRDVRT IELEVLCPEM LHAAPAGASP AQPADSHLAG GPTSASPYEF SPSGGPVPLS
VLILSLLVLF FSAVFVAAGL FAYVLRRRRK KLPFRSKRQE GVDLTGIQMQ CHRLPTLSSP
EKAPTVGHVY EYIPHPVTQM CNNPIYKPRE EEEVVISSVQ EPGGAERGGP GTQPPGMGEV
LLGSEQFAET PKENHSNYRT LLEKEKEWTL AMSGSQLNTI VTVNHHHPHP HPHHPGGGDA
RLKETLLFSA GKGFTDQQTQ KSDYLELRAK LQTKPDYLEV LEKTTYRF
//