GenomeNet

Database: UniProt
Entry: G3U7S4_LOXAF
LinkDB: G3U7S4_LOXAF
Original site: G3U7S4_LOXAF 
ID   G3U7S4_LOXAF            Unreviewed;       638 AA.
AC   G3U7S4;
DT   16-NOV-2011, integrated into UniProtKB/TrEMBL.
DT   16-NOV-2011, sequence version 1.
DT   27-MAR-2024, entry version 55.
DE   SubName: Full=FMR1 autosomal homolog 2 {ECO:0000313|Ensembl:ENSLAFP00000023882.1};
GN   Name=FXR2 {ECO:0000313|Ensembl:ENSLAFP00000023882.1};
OS   Loxodonta africana (African elephant).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta.
OX   NCBI_TaxID=9785 {ECO:0000313|Ensembl:ENSLAFP00000023882.1, ECO:0000313|Proteomes:UP000007646};
RN   [1] {ECO:0000313|Ensembl:ENSLAFP00000023882.1, ECO:0000313|Proteomes:UP000007646}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Isolate ISIS603380 {ECO:0000313|Ensembl:ENSLAFP00000023882.1,
RC   ECO:0000313|Proteomes:UP000007646};
RA   Di Palma F., Heiman D., Young S., Johnson J., Lander E.S., Lindblad-Toh K.;
RT   "The Genome Sequence of Loxodonta africana (African elephant).";
RL   Submitted (JUN-2009) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|Ensembl:ENSLAFP00000023882.1}
RP   IDENTIFICATION.
RC   STRAIN=Isolate ISIS603380 {ECO:0000313|Ensembl:ENSLAFP00000023882.1};
RG   Ensembl;
RL   Submitted (NOV-2023) to UniProtKB.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm, Cytoplasmic ribonucleoprotein granule
CC       {ECO:0000256|ARBA:ARBA00004331}. Postsynapse
CC       {ECO:0000256|ARBA:ARBA00034110}. Synapse
CC       {ECO:0000256|ARBA:ARBA00034103}.
CC   -!- SIMILARITY: Belongs to the FMR1 family.
CC       {ECO:0000256|ARBA:ARBA00006633}.
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DR   AlphaFoldDB; G3U7S4; -.
DR   Ensembl; ENSLAFT00000032177.1; ENSLAFP00000023882.1; ENSLAFG00000001114.3.
DR   GeneTree; ENSGT00950000183189; -.
DR   Proteomes; UP000007646; Unassembled WGS sequence.
DR   GO; GO:0036464; C:cytoplasmic ribonucleoprotein granule; IEA:UniProtKB-SubCell.
DR   GO; GO:0098794; C:postsynapse; IEA:UniProtKB-SubCell.
DR   GO; GO:0003729; F:mRNA binding; IEA:InterPro.
DR   GO; GO:0006417; P:regulation of translation; IEA:InterPro.
DR   CDD; cd22505; KH_I_FXR2_rpt1; 1.
DR   CDD; cd22508; KH_I_FXR2_rpt2; 1.
DR   CDD; cd22511; KH_I_FXR2_rpt3; 1.
DR   CDD; cd20476; Tudor_Agenet_FXR2_rpt2; 1.
DR   Gene3D; 2.30.30.140; -; 2.
DR   Gene3D; 3.30.1370.10; K Homology domain, type 1; 2.
DR   InterPro; IPR008395; Agenet-like_dom.
DR   InterPro; IPR040148; FMR1.
DR   InterPro; IPR022034; FMR1-like_C_core.
DR   InterPro; IPR040472; FMRP_KH0.
DR   InterPro; IPR032172; FXR1_C1.
DR   InterPro; IPR004087; KH_dom.
DR   InterPro; IPR004088; KH_dom_type_1.
DR   InterPro; IPR036612; KH_dom_type_1_sf.
DR   InterPro; IPR047422; KH_I_FXR2_rpt1.
DR   InterPro; IPR047424; KH_I_FXR2_rpt2.
DR   InterPro; IPR047420; Tudor_Agenet_FXR2_rpt2.
DR   InterPro; IPR041560; Tudor_FRM1.
DR   PANTHER; PTHR10603; FRAGILE X MENTAL RETARDATION SYNDROME-RELATED PROTEIN; 1.
DR   PANTHER; PTHR10603:SF3; FRAGILE X MENTAL RETARDATION SYNDROME-RELATED PROTEIN 2; 1.
DR   Pfam; PF05641; Agenet; 1.
DR   Pfam; PF12235; FXMRP1_C_core; 1.
DR   Pfam; PF16096; FXR_C1; 1.
DR   Pfam; PF00013; KH_1; 2.
DR   Pfam; PF17904; KH_9; 1.
DR   Pfam; PF18336; Tudor_FRX1; 1.
DR   SMART; SM00322; KH; 2.
DR   SUPFAM; SSF54791; Eukaryotic type KH-domain (KH-domain type I); 2.
DR   PROSITE; PS51641; AGENET_LIKE; 2.
DR   PROSITE; PS50084; KH_TYPE_1; 2.
PE   3: Inferred from homology;
KW   Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW   Reference proteome {ECO:0000313|Proteomes:UP000007646};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737};
KW   RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00117}.
FT   DOMAIN          1..33
FT                   /note="Agenet-like"
FT                   /evidence="ECO:0000259|PROSITE:PS51641"
FT   DOMAIN          46..98
FT                   /note="Agenet-like"
FT                   /evidence="ECO:0000259|PROSITE:PS51641"
FT   REGION          362..638
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        380..417
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        418..451
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        465..488
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        588..602
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   638 AA;  70724 MW;  8D8392EDF559DC2D CRC64;
     GFVKDVHEDS VTIFFENNWQ SERQIPFGDV RLPPPADYNK EITEGDEVEV YSRANEQEPC
     GWWLARVRMM KGDFYVIEYA ACDATYNEIV TLERLRPVNP NPLATKGSFF KVTMAVPEDL
     REACSNENVH KEFKKALGAN CIFLNITNSE LFILSTTEAP VKRASLLGDM HFRSLRTKLL
     LMSRNEEATK HLETSKQLAA AFQEEFTVRE DLMGLAIGTH GANIQQARKV PGVTAIELGE
     ETCTFRIYGE TPEACRQARS YLEFSEDSVQ VPRNMVGKVI GKNGKVIQEI VDKSGVVRVR
     VEGDNDKKNP REEGMVPFIF VGTRENISNA QALLEYHLSY LQEVEQLRLE RLQIDEQLRQ
     IGLGFRPPGS GRGSGGSDKA GYTTDESSSS SLHTTRTYGG SWTGGSAYGP GSDPSTASET
     ESEKREEPNR AGPGDRDPPT RGEESRRRPT GGRGRGPPPA PRPTSRYNSS SISSVLKDPD
     SNPYSLLDTS EPEPPADSEP GEPPPASARR RRSRRRRTDE DRTVMDGGLE SDGPNMTENG
     LEDESRPQRR NRSRRRRNRG NRTDGSISGD RQPVTVADYI SRAESQSRQR PALERTKPSE
     DSLSGQKGDS VSKLPKGPSE NGELSTPLEL GSLVNGVS
//
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