ID G4E723_9GAMM Unreviewed; 709 AA.
AC G4E723;
DT 14-DEC-2011, integrated into UniProtKB/TrEMBL.
DT 14-DEC-2011, sequence version 1.
DT 27-MAR-2024, entry version 45.
DE SubName: Full=Putative PAS/PAC sensor protein {ECO:0000313|EMBL:EGZ44273.1};
DE EC=2.7.7.7 {ECO:0000313|EMBL:EGZ44273.1};
GN ORFNames=ThisiDRAFT_2102 {ECO:0000313|EMBL:EGZ44273.1};
OS Thiorhodospira sibirica ATCC 700588.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Chromatiales;
OC Ectothiorhodospiraceae; Thiorhodospira.
OX NCBI_TaxID=765914 {ECO:0000313|EMBL:EGZ44273.1};
RN [1] {ECO:0000313|EMBL:EGZ44273.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 700588 {ECO:0000313|EMBL:EGZ44273.1};
RG US DOE Joint Genome Institute (JGI-PGF);
RA Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S.,
RA Peters L., Land M.L., Hauser L., Vogl K., Liu Z., Imhoff J.,
RA Frigaard N.-U., Bryant D., Woyke T.;
RT "The draft genome of Thiorhodospira sibirica ATCC 700588.";
RL Submitted (SEP-2011) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EGZ44273.1}.
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DR EMBL; AGFD01000045; EGZ44273.1; -; Genomic_DNA.
DR RefSeq; WP_006788118.1; NZ_MU255056.1.
DR AlphaFoldDB; G4E723; -.
DR STRING; 765914.ThisiDRAFT_2102; -.
DR eggNOG; COG0847; Bacteria.
DR eggNOG; COG5000; Bacteria.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-EC.
DR GO; GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.
DR GO; GO:0006260; P:DNA replication; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd06127; DEDDh; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR006054; DnaQ.
DR InterPro; IPR013520; Exonuclease_RNaseT/DNA_pol3.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013767; PAS_fold.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR NCBIfam; TIGR00573; dnaq; 1.
DR PANTHER; PTHR30231; DNA POLYMERASE III SUBUNIT EPSILON; 1.
DR PANTHER; PTHR30231:SF4; PROTEIN NEN2; 1.
DR Pfam; PF00989; PAS; 1.
DR Pfam; PF00929; RNase_T; 1.
DR SMART; SM00479; EXOIII; 1.
DR SMART; SM00091; PAS; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
PE 4: Predicted;
KW Exonuclease {ECO:0000256|ARBA:ARBA00022839};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022839};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Nucleotidyltransferase {ECO:0000313|EMBL:EGZ44273.1};
KW Transferase {ECO:0000313|EMBL:EGZ44273.1};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 7..32
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 38..61
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 134..200
FT /note="PAS"
FT /evidence="ECO:0000259|SMART:SM00091"
FT DOMAIN 506..675
FT /note="Exonuclease"
FT /evidence="ECO:0000259|SMART:SM00479"
SQ SEQUENCE 709 AA; 78900 MW; A4CAFDBB1FF6A29A CRC64;
MSMQRQNLFI LIPLVIFCLL VFALLVLTAW YAGLSPGAAL QLALLPGVVL GLLAVVLWLV
LKRLCLRPAR QLSRGIRALL ESRLVDREIP LPRHHALHTL PDQVQALADS LRGARREMRV
AMESAAAQSA EQKRWLEIIL QGLTEGVLVC NKNHQILLYN ASAVSLLENP ERVGLGRSLL
EVLSPAPVRH TMERLEWRQR TGDENANELS APFVCTNRAS HKIMHGRMAL IRDDSEEITG
YLITLIDISN DVATLMRLDS VRRAIIRDLR SATANLRAAA EVLADSPTLS AQERQPFETV
LTVEARELSH TLDALAGEFR GHALGRWPMA DIYSADLVNC LARHLEGPYG MTVSHVGHPL
WLQGDSLSLL LVMSRLLQQV QQLQGVSHFE IEALLGDRRV YLDIRWQGQP IPVATLDQWI
EQVCGEELDS ETIRDVLERH GSEIWSQDGA EADLALVRIP LLSPLRHQFA VTEEQLPARP
EFYDFGLMRE HEGDAGLAQR LLSDLAYVVF DTETTGLDPV GGDEIISIGG VRVVKGRVLS
GETFERLIHP GRPIPPGSIR FHGITDEMVH DQPPIREVLP RFQNFVGEDA ILVAHNAAYD
MKFLRLKEES CGVVFRNPVI DTLLLSVMLE PDEEDHSLDA LCERYGIRVS GRHTALGDAL
ATAGVLIHLI DRLQAKGIST FGDVMHESNM AAKLRLRDSM LNQQGSGYT
//
