GenomeNet

Database: UniProt
Entry: G4VK63_SCHMA
LinkDB: G4VK63_SCHMA
Original site: G4VK63_SCHMA 
ID   G4VK63_SCHMA            Unreviewed;       328 AA.
AC   G4VK63;
DT   14-DEC-2011, integrated into UniProtKB/TrEMBL.
DT   14-DEC-2011, sequence version 1.
DT   24-JAN-2024, entry version 68.
DE   RecName: Full=U1 small nuclear ribonucleoprotein A {ECO:0000256|ARBA:ARBA00017955};
OS   Schistosoma mansoni (Blood fluke).
OC   Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Platyhelminthes; Trematoda;
OC   Digenea; Strigeidida; Schistosomatoidea; Schistosomatidae; Schistosoma.
OX   NCBI_TaxID=6183 {ECO:0000313|Proteomes:UP000008854, ECO:0000313|WBParaSite:Smp_069870.1};
RN   [1] {ECO:0000313|Proteomes:UP000008854}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Puerto Rican {ECO:0000313|Proteomes:UP000008854};
RX   PubMed=22253936; DOI=10.1371/journal.pntd.0001455;
RA   Protasio A.V., Tsai I.J., Babbage A., Nichol S., Hunt M., Aslett M.A.,
RA   De Silva N., Velarde G.S., Anderson T.J., Clark R.C., Davidson C.,
RA   Dillon G.P., Holroyd N.E., LoVerde P.T., Lloyd C., McQuillan J.,
RA   Oliveira G., Otto T.D., Parker-Manuel S.J., Quail M.A., Wilson R.A.,
RA   Zerlotini A., Dunne D.W., Berriman M.;
RT   "A systematically improved high quality genome and transcriptome of the
RT   human blood fluke Schistosoma mansoni.";
RL   PLoS Negl. Trop. Dis. 6:E1455-E1455(2012).
RN   [2] {ECO:0000313|WBParaSite:Smp_069870.1}
RP   IDENTIFICATION.
RC   STRAIN=Puerto Rican {ECO:0000313|WBParaSite:Smp_069870.1};
RG   WormBaseParasite;
RL   Submitted (DEC-2018) to UniProtKB.
CC   -!- SIMILARITY: Belongs to the RRM U1 A/B'' family.
CC       {ECO:0000256|ARBA:ARBA00007243}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   RefSeq; XP_018652673.1; XM_018797652.1.
DR   AlphaFoldDB; G4VK63; -.
DR   STRING; 6183.G4VK63; -.
DR   EnsemblMetazoa; Smp_069870.1; Smp_069870.1; Smp_069870.
DR   GeneID; 8346507; -.
DR   KEGG; smm:Smp_069870; -.
DR   WBParaSite; Smp_069870.1; Smp_069870.1; Smp_069870.
DR   CTD; 8346507; -.
DR   eggNOG; KOG4206; Eukaryota.
DR   HOGENOM; CLU_041869_0_1_1; -.
DR   InParanoid; G4VK63; -.
DR   OMA; PMRINFA; -.
DR   OrthoDB; 227381at2759; -.
DR   PhylomeDB; G4VK63; -.
DR   Proteomes; UP000008854; Unassembled WGS sequence.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR   Gene3D; 3.30.70.330; -; 2.
DR   InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR   InterPro; IPR035979; RBD_domain_sf.
DR   InterPro; IPR000504; RRM_dom.
DR   PANTHER; PTHR10501:SF13; U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A; 1.
DR   PANTHER; PTHR10501; U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A/U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B; 1.
DR   Pfam; PF00076; RRM_1; 2.
DR   SMART; SM00360; RRM; 2.
DR   SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR   PROSITE; PS50102; RRM; 2.
PE   3: Inferred from homology;
KW   mRNA processing {ECO:0000256|ARBA:ARBA00022664};
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008854};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737};
KW   Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274};
KW   RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176}.
FT   DOMAIN          58..137
FT                   /note="RRM"
FT                   /evidence="ECO:0000259|PROSITE:PS50102"
FT   DOMAIN          254..328
FT                   /note="RRM"
FT                   /evidence="ECO:0000259|PROSITE:PS50102"
FT   REGION          210..251
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        211..231
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        232..247
FT                   /note="Pro residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   328 AA;  34506 MW;  F01631E06C06B224 CRC64;
     MNPIATGNIP IIPPVAAPNL LVGLPHMAAP GALPSVTPAV VMPQALTRMP ESIGQPNNTI
     YINNMNEKIK CDELKKSLCA VFDQFGQILD IITSRTLKMR GQAFVVFDDI SSASTALRSM
     QGFPLYEKPM RIHFAKVDSD VIAKRKGTFV QRPKAASRAA AAAAAAAAAE AAASAAAINS
     AGPQGGTSAR AIRRRQQRAA AAAAAAAAAA SASANNDTTN EKSSNGVDQT SSYCPPPPPP
     TVNPATIPDQ PPNKILFLTN LPDDSDEAML SMLFGQFTGY REVRMVPGRH DIAFVEFGNE
     VEASAAKLGL QGFNIRPGQA IRITFAKK
//
DBGET integrated database retrieval system