ID G4WP15_9CARY Unreviewed; 1142 AA.
AC G4WP15;
DT 14-DEC-2011, integrated into UniProtKB/TrEMBL.
DT 14-DEC-2011, sequence version 1.
DT 27-MAR-2024, entry version 29.
DE RecName: Full=DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00012418};
DE EC=2.7.7.6 {ECO:0000256|ARBA:ARBA00012418};
DE Flags: Fragment;
GN Name=rpoC2 {ECO:0000313|EMBL:AEP25234.1};
OS Triphyophyllum peltatum.
OG Plastid; Chloroplast {ECO:0000313|EMBL:AEP25234.1}.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC Caryophyllales; Dioncophyllaceae; Triphyophyllum.
OX NCBI_TaxID=63090 {ECO:0000313|EMBL:AEP25234.1};
RN [1] {ECO:0000313|EMBL:AEP25234.1}
RP NUCLEOTIDE SEQUENCE.
RX AGRICOLA=IND44210538; DOI=10.1086/597785;
RA Brockington S.F., Soltis P.S., Soltis D.E.;
RT "Phylogeny of the caryophyllales sensu lato: revisiting hypotheses on
RT pollination biology and perianth differentiation in the core
RT caryophyllales.";
RL Int. J. Plant Sci. 170:627-643(2009).
RN [2] {ECO:0000313|EMBL:AEP25234.1}
RP NUCLEOTIDE SEQUENCE.
RA Brockington S.F., Soltis P.S., Soltis D.E.;
RL Submitted (JAN-2011) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; HQ843390; AEP25234.1; -; Genomic_DNA.
DR AlphaFoldDB; G4WP15; -.
DR GO; GO:0009507; C:chloroplast; IEA:UniProtKB-KW.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-EC.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR Gene3D; 1.10.132.30; -; 1.
DR Gene3D; 1.10.274.100; RNA polymerase Rpb1, domain 3; 1.
DR InterPro; IPR042102; RNA_pol_Rpb1_3_sf.
DR InterPro; IPR007083; RNA_pol_Rpb1_4.
DR InterPro; IPR007081; RNA_pol_Rpb1_5.
DR InterPro; IPR038120; Rpb1_funnel_sf.
DR PANTHER; PTHR48355; DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA; 1.
DR PANTHER; PTHR48355:SF2; DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA; 1.
DR Pfam; PF05000; RNA_pol_Rpb1_4; 1.
DR Pfam; PF04998; RNA_pol_Rpb1_5; 1.
DR SUPFAM; SSF64484; beta and beta-prime subunits of DNA dependent RNA-polymerase; 1.
PE 4: Predicted;
KW Chloroplast {ECO:0000313|EMBL:AEP25234.1};
KW DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW Plastid {ECO:0000313|EMBL:AEP25234.1};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transferase {ECO:0000256|ARBA:ARBA00022679};
KW Zinc {ECO:0000256|ARBA:ARBA00022833}.
FT DOMAIN 99..164
FT /note="RNA polymerase Rpb1"
FT /evidence="ECO:0000259|Pfam:PF05000"
FT DOMAIN 176..369
FT /note="RNA polymerase Rpb1"
FT /evidence="ECO:0000259|Pfam:PF04998"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:AEP25234.1"
FT NON_TER 1142
FT /evidence="ECO:0000313|EMBL:AEP25234.1"
SQ SEQUENCE 1142 AA; 130369 MW; C9ED3203C8CDAEE2 CRC64;
MEVLMAEQTN LVFHNKVIDG TAMKRLISRL IDHFGMAYTS HILDQVKTLG FQQATATSIS
LGIHDLLTRP SKGWLVQDAE QESSILEKHH HYGNVHVVEK LRQSIEIWYA TSEYLRQEMN
PNFRMTDPYN PVHIMSFSGA RGSTSQVHQL VGMRGLMSDP QGQMIELPIQ SNLCEGLSLT
EYIISCYGAR KGVVDTAVRT SDAGYLTRRL VEVVQHIVVR RTDCGTIRGI SVSPRKRTMP
DRIFIQTLIG RVLADDIYIG PRCIATRNQE IGVGLVNRFI TFRVQPISIR TPFTCRSTSW
ICRLCYGRSP THGDLVELGE AVGIIAGQSI GEPGTQLTLR TFHTGGIFTG CTAEHIRAPS
SGKIQFNEYL VHPTRTRHGH PAFLCYIDLY VTIEREDILY NVNIPPKSFL LVQNEQYVES
EQVIAEIRAG TSTLNFKERV QKHIYSESEG EMHWSTDVYH APEFTYGNVH LLPKTSHLWI
LSGRPQRSSV APFSLHKDQD QTNIHSLSAE QRYISNSSAT NDPVRHKFAS SGLSSKKEDR
IFYYSELNRI VCTGHSNLIY PAKNSDLLAK RRRNSFIIPF QLIQERETEL MPPSGISIEI
PINGIFRRNS ILAYFDDPRY RRKSSGSLNY RTIEAQTIVK KEGLIEYRGV EEFRPKYQMK
VDRFFFIPEE IHILPASSSI MVRNNSLIGV DTQITLNTRS RVGGLVRVEE KEKEIELKIV
SGDIYFLGER DKISRHSGIL IPPRRGKTNS KESKNLKNWI YVQGIILTKK KDFVLVRPVI
PYFIWDGINL ATLFPQDLLK EKDNVELRVV NYILYGNDKP IQGISDRSIQ LVRTCLVVNW
DQDKKNSSIE EARAYFVEVK TNGIIRDSLR IHFVKSTISY TGRIRKRNDL SGSGFFSDNG
LDRTNINPFY FIYSKTRLQQ SFSQNEGTVR TFLNRNKECQ SFLILSSSNC FRMGPVKGVK
YHKESIKKDP RIPIWNSSGP LGTALPIVNF YSFYRLITHN PILVTNYLQL KHNFQVLKYY
LIDENRRILN PDPCSNIILN PFKLNWYCLH HNSCEETSTK ISLGQFLCEN VCIAKNGTNL
KSGQILIVQV NSVVIRSAKP YLAIPEATVH GHYGEIIYEG DPLVTFLYEK SRSGDITQVP
SK
//
