ID   G5SEM6_SALET            Unreviewed;       475 AA.
AC   G5SEM6;
DT   25-JAN-2012, integrated into UniProtKB/TrEMBL.
DT   25-JAN-2012, sequence version 1.
DT   27-MAR-2024, entry version 50.
DE   SubName: Full=Putative regulatory protein {ECO:0000313|EMBL:EHD01272.1};
GN   ORFNames=LTSEWAN_3856 {ECO:0000313|EMBL:EHD01272.1};
OS   Salmonella enterica subsp. enterica serovar Wandsworth str. A4-580.
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
OC   Enterobacteriaceae; Salmonella.
OX   NCBI_TaxID=913086 {ECO:0000313|EMBL:EHD01272.1, ECO:0000313|Proteomes:UP000003536};
RN   [1] {ECO:0000313|EMBL:EHD01272.1, ECO:0000313|Proteomes:UP000003536}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=A4-580 {ECO:0000313|EMBL:EHD01272.1,
RC   ECO:0000313|Proteomes:UP000003536};
RX   PubMed=21859443; DOI=10.1186/1471-2164-12-425;
RA   den Bakker H.C., Moreno Switt A.I., Govoni G., Cummings C.A., Ranieri M.L.,
RA   Degoricija L., Hoelzer K., Rodriguez-Rivera L.D., Brown S., Bolchacova E.,
RA   Furtado M.R., Wiedmann M.;
RT   "Genome sequencing reveals diversification of virulence factor content and
RT   possible host adaptation in distinct subpopulations of Salmonella
RT   enterica.";
RL   BMC Genomics 12:425-425(2011).
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:EHD01272.1}.
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DR   EMBL; AFCX01001252; EHD01272.1; -; Genomic_DNA.
DR   AlphaFoldDB; G5SEM6; -.
DR   PATRIC; fig|913086.3.peg.2969; -.
DR   Proteomes; UP000003536; Unassembled WGS sequence.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR   CDD; cd00009; AAA; 1.
DR   CDD; cd00130; PAS; 1.
DR   Gene3D; 1.10.8.60; -; 1.
DR   Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR   Gene3D; 3.30.450.20; PAS domain; 1.
DR   InterPro; IPR003593; AAA+_ATPase.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR002197; HTH_Fis.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR000014; PAS.
DR   InterPro; IPR035965; PAS-like_dom_sf.
DR   InterPro; IPR013656; PAS_4.
DR   InterPro; IPR002078; Sigma_54_int.
DR   InterPro; IPR025943; Sigma_54_int_dom_ATP-bd_2.
DR   NCBIfam; TIGR00229; sensory_box; 1.
DR   PANTHER; PTHR32071:SF121; PTS-DEPENDENT DIHYDROXYACETONE KINASE OPERON REGULATORY PROTEIN-RELATED; 1.
DR   PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR   Pfam; PF02954; HTH_8; 1.
DR   Pfam; PF08448; PAS_4; 1.
DR   Pfam; PF00158; Sigma54_activat; 1.
DR   PRINTS; PR01590; HTHFIS.
DR   SMART; SM00382; AAA; 1.
DR   SUPFAM; SSF46689; Homeodomain-like; 1.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR   SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR   PROSITE; PS50112; PAS; 1.
DR   PROSITE; PS00676; SIGMA54_INTERACT_2; 1.
DR   PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE   4: Predicted;
KW   ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT   DOMAIN          11..59
FT                   /note="PAS"
FT                   /evidence="ECO:0000259|PROSITE:PS50112"
FT   DOMAIN          151..379
FT                   /note="Sigma-54 factor interaction"
FT                   /evidence="ECO:0000259|PROSITE:PS50045"
SQ   SEQUENCE   475 AA;  53396 MW;  E7DDD6D5073C9462 CRC64;
     MASTNQELAS ALRMFSRFFD LIHQPLAVIN ERGEYVYYNQ ESADLDGYSI ERAMGKHMLD
     VYPGMKETQS TMLSSLKKGV EYIGHYQIYY NARGQAVDYQ HTTAPLYASD GGMVGVIEIG
     RNMSGVRRLQ EQVVELNQLL YADHHEKHHA IITENPEMLS NIAKAKRLAA SNIPVTIVGE
     TGTGKELFSR LIHQCSKRAN KPFIALNCGA LPPTLIESTL FGTVRGAYTG AENSQGYLEL
     ANGGTLFLDE LNAMPIEMQS KLLRFLQDKT FWRLGGQQQL HSDVRIVAAM NEAPVKLIQQ
     ERLRADLFYR LSVGMLTLPP LRARPEDIPL LANYFIDKYR NDVPQDIHGL SETARADLLN
     HAWPGNVRML ENAIVRSMIM QEKDGLLKHI IFEQDELNLG VPETAPENPL PSSPDPQYEG
     SLEVRVANYE RHLIETALDT HQGNIAAAAR SLNVSRTTLQ YKVQKYAIRF GVVRN
//