ID G7I0A8_9CORY Unreviewed; 528 AA.
AC G7I0A8;
DT 25-JAN-2012, integrated into UniProtKB/TrEMBL.
DT 25-JAN-2012, sequence version 1.
DT 24-JAN-2024, entry version 50.
DE RecName: Full=D-3-phosphoglycerate dehydrogenase {ECO:0000256|ARBA:ARBA00021582, ECO:0000256|RuleBase:RU363003};
DE EC=1.1.1.95 {ECO:0000256|RuleBase:RU363003};
GN Name=serA {ECO:0000313|EMBL:CCE55873.1};
GN ORFNames=CCAS_11990 {ECO:0000313|EMBL:CCE55873.1};
OS Corynebacterium casei UCMA 3821.
OC Bacteria; Actinomycetota; Actinomycetes; Mycobacteriales;
OC Corynebacteriaceae; Corynebacterium.
OX NCBI_TaxID=1110505 {ECO:0000313|EMBL:CCE55873.1, ECO:0000313|Proteomes:UP000004840};
RN [1] {ECO:0000313|EMBL:CCE55873.1, ECO:0000313|Proteomes:UP000004840}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=UCMA 3821 {ECO:0000313|EMBL:CCE55873.1,
RC ECO:0000313|Proteomes:UP000004840};
RX PubMed=22247534; DOI=10.1128/JB.06496-11;
RA Monnet C., Loux V., Bento P., Gibrat J.F., Straub C., Bonnarme P.,
RA Landaud S., Irlinger F.;
RT "Genome Sequence of Corynebacterium casei UCMA 3821, Isolated from a Smear-
RT Ripened Cheese.";
RL J. Bacteriol. 194:738-739(2012).
CC -!- FUNCTION: Catalyzes the reversible oxidation of 3-phospho-D-glycerate
CC to 3-phosphonooxypyruvate, the first step of the phosphorylated L-
CC serine biosynthesis pathway. Also catalyzes the reversible oxidation of
CC 2-hydroxyglutarate to 2-oxoglutarate. {ECO:0000256|ARBA:ARBA00003800}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=(2R)-3-phosphoglycerate + NAD(+) = 3-phosphooxypyruvate + H(+)
CC + NADH; Xref=Rhea:RHEA:12641, ChEBI:CHEBI:15378, ChEBI:CHEBI:18110,
CC ChEBI:CHEBI:57540, ChEBI:CHEBI:57945, ChEBI:CHEBI:58272; EC=1.1.1.95;
CC Evidence={ECO:0000256|ARBA:ARBA00001878,
CC ECO:0000256|RuleBase:RU363003};
CC -!- CATALYTIC ACTIVITY:
CC Reaction=(R)-2-hydroxyglutarate + NAD(+) = 2-oxoglutarate + H(+) +
CC NADH; Xref=Rhea:RHEA:49612, ChEBI:CHEBI:15378, ChEBI:CHEBI:15801,
CC ChEBI:CHEBI:16810, ChEBI:CHEBI:57540, ChEBI:CHEBI:57945;
CC EC=1.1.1.399; Evidence={ECO:0000256|ARBA:ARBA00000646};
CC -!- PATHWAY: Amino-acid biosynthesis; L-serine biosynthesis; L-serine from
CC 3-phospho-D-glycerate: step 1/3. {ECO:0000256|ARBA:ARBA00005216,
CC ECO:0000256|RuleBase:RU363003}.
CC -!- SIMILARITY: Belongs to the D-isomer specific 2-hydroxyacid
CC dehydrogenase family. {ECO:0000256|ARBA:ARBA00005854,
CC ECO:0000256|RuleBase:RU363003}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CCE55873.1}.
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DR EMBL; CAFW01000088; CCE55873.1; -; Genomic_DNA.
DR RefSeq; WP_006823317.1; NZ_CAFW01000088.1.
DR AlphaFoldDB; G7I0A8; -.
DR UniPathway; UPA00135; UER00196.
DR Proteomes; UP000004840; Unassembled WGS sequence.
DR GO; GO:0051287; F:NAD binding; IEA:UniProtKB-UniRule.
DR GO; GO:0004617; F:phosphoglycerate dehydrogenase activity; IEA:UniProtKB-EC.
DR GO; GO:0006564; P:L-serine biosynthetic process; IEA:UniProtKB-KW.
DR CDD; cd12173; PGDH_4; 1.
DR Gene3D; 3.30.70.260; -; 1.
DR Gene3D; 3.40.50.720; NAD(P)-binding Rossmann-like Domain; 2.
DR InterPro; IPR045865; ACT-like_dom_sf.
DR InterPro; IPR002912; ACT_dom.
DR InterPro; IPR029009; ASB_dom_sf.
DR InterPro; IPR006139; D-isomer_2_OHA_DH_cat_dom.
DR InterPro; IPR029753; D-isomer_DH_CS.
DR InterPro; IPR029752; D-isomer_DH_CS1.
DR InterPro; IPR006140; D-isomer_DH_NAD-bd.
DR InterPro; IPR036291; NAD(P)-bd_dom_sf.
DR InterPro; IPR006236; PGDH.
DR InterPro; IPR045626; PGDH_ASB_dom.
DR NCBIfam; TIGR01327; PGDH; 1.
DR PANTHER; PTHR42938; FORMATE DEHYDROGENASE 1; 1.
DR PANTHER; PTHR42938:SF9; FORMATE DEHYDROGENASE 1; 1.
DR Pfam; PF00389; 2-Hacid_dh; 1.
DR Pfam; PF02826; 2-Hacid_dh_C; 1.
DR Pfam; PF19304; PGDH_inter; 1.
DR SUPFAM; SSF55021; ACT-like; 1.
DR SUPFAM; SSF52283; Formate/glycerate dehydrogenase catalytic domain-like; 1.
DR SUPFAM; SSF51735; NAD(P)-binding Rossmann-fold domains; 1.
DR SUPFAM; SSF143548; Serine metabolism enzymes domain; 1.
DR PROSITE; PS51671; ACT; 1.
DR PROSITE; PS00065; D_2_HYDROXYACID_DH_1; 1.
DR PROSITE; PS00671; D_2_HYDROXYACID_DH_3; 1.
PE 3: Inferred from homology;
KW Amino-acid biosynthesis {ECO:0000256|RuleBase:RU363003};
KW NAD {ECO:0000256|RuleBase:RU363003};
KW Oxidoreductase {ECO:0000256|ARBA:ARBA00023002,
KW ECO:0000256|RuleBase:RU363003};
KW Serine biosynthesis {ECO:0000256|ARBA:ARBA00023299,
KW ECO:0000256|RuleBase:RU363003}.
FT DOMAIN 455..528
FT /note="ACT"
FT /evidence="ECO:0000259|PROSITE:PS51671"
SQ SEQUENCE 528 AA; 55196 MW; 5803CB4C056CE956 CRC64;
MSKPVVLIAD KLAPSTVEAL GDGVEVRWVD GPNRDELLAA VGEADALLVR SATTVNEEVL
EAANNLKIVG RAGVGLDNVD VPAATARGVM VVNAPTSNIH SACEHAISLL LSTARQIPQA
DATLREGEWK RSSFKGVEIY GKTVGIVGFG HIGQLFAHRL KAFETEIIAY DPYANPARAA
SLGVELVDLE ELMSRSDFVT IHLPKTPETA GMFSAELLAK AKKGQIIINA ARGGLVDEQA
LADSIKAGHH WGAGFDVYST EPCTDSPLFA LPQVVVTPHL GASTVEAQDR AGTDVAESVL
KALAGEFVPD AVNVSGGRVG EEVAGWLDLA RKLGLASGKL LRSAPVAIEV TACGQLSTED
VEVLGLSAVR GLFSGVTSEA VTFVNAMSIA ESRGVTVKVS STEEAKGHNS TVRVKTISAD
GDTSVLEGAL TGIDGVEKIV RIDGRGVDMR ATGRNLFFSY TDRPGALGVV GSVLGGAGIN
IQAAALTQGK KDDAAVLILR VEREVNDELI ADIQDKLEAK SLQVNFDA
//