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Database: UniProt
Entry: G7IV46_MEDTR
LinkDB: G7IV46_MEDTR
Original site: G7IV46_MEDTR 
ID   G7IV46_MEDTR            Unreviewed;       433 AA.
AC   G7IV46;
DT   25-JAN-2012, integrated into UniProtKB/TrEMBL.
DT   25-JAN-2012, sequence version 1.
DT   24-JAN-2024, entry version 64.
DE   RecName: Full=DNA primase {ECO:0000256|RuleBase:RU003514};
DE            EC=2.7.7.- {ECO:0000256|RuleBase:RU003514};
GN   Name=11439115 {ECO:0000313|EnsemblPlants:AES70797};
GN   OrderedLocusNames=MTR_3g062490 {ECO:0000313|EMBL:AES70797.1};
GN   ORFNames=MtrunA17_Chr3g0108291 {ECO:0000313|EMBL:RHN67941.1};
OS   Medicago truncatula (Barrel medic) (Medicago tribuloides).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC   NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago.
OX   NCBI_TaxID=3880 {ECO:0000313|EMBL:AES70797.1, ECO:0000313|Proteomes:UP000002051};
RN   [1] {ECO:0000313|EMBL:AES70797.1, ECO:0000313|Proteomes:UP000002051}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=A17 {ECO:0000313|EMBL:AES70797.1}, and cv. Jemalong A17
RC   {ECO:0000313|EnsemblPlants:AES70797,
RC   ECO:0000313|Proteomes:UP000002051};
RX   PubMed=22089132; DOI=10.1038/nature10625;
RA   Young N.D., Debelle F., Oldroyd G.E., Geurts R., Cannon S.B., Udvardi M.K.,
RA   Benedito V.A., Mayer K.F., Gouzy J., Schoof H., Van de Peer Y., Proost S.,
RA   Cook D.R., Meyers B.C., Spannagl M., Cheung F., De Mita S.,
RA   Krishnakumar V., Gundlach H., Zhou S., Mudge J., Bharti A.K., Murray J.D.,
RA   Naoumkina M.A., Rosen B., Silverstein K.A., Tang H., Rombauts S.,
RA   Zhao P.X., Zhou P., Barbe V., Bardou P., Bechner M., Bellec A., Berger A.,
RA   Berges H., Bidwell S., Bisseling T., Choisne N., Couloux A., Denny R.,
RA   Deshpande S., Dai X., Doyle J.J., Dudez A.M., Farmer A.D., Fouteau S.,
RA   Franken C., Gibelin C., Gish J., Goldstein S., Gonzalez A.J., Green P.J.,
RA   Hallab A., Hartog M., Hua A., Humphray S.J., Jeong D.H., Jing Y.,
RA   Jocker A., Kenton S.M., Kim D.J., Klee K., Lai H., Lang C., Lin S.,
RA   Macmil S.L., Magdelenat G., Matthews L., McCorrison J., Monaghan E.L.,
RA   Mun J.H., Najar F.Z., Nicholson C., Noirot C., O'Bleness M., Paule C.R.,
RA   Poulain J., Prion F., Qin B., Qu C., Retzel E.F., Riddle C., Sallet E.,
RA   Samain S., Samson N., Sanders I., Saurat O., Scarpelli C., Schiex T.,
RA   Segurens B., Severin A.J., Sherrier D.J., Shi R., Sims S., Singer S.R.,
RA   Sinharoy S., Sterck L., Viollet A., Wang B.B., Wang K., Wang M., Wang X.,
RA   Warfsmann J., Weissenbach J., White D.D., White J.D., Wiley G.B.,
RA   Wincker P., Xing Y., Yang L., Yao Z., Ying F., Zhai J., Zhou L., Zuber A.,
RA   Denarie J., Dixon R.A., May G.D., Schwartz D.C., Rogers J., Quetier F.,
RA   Town C.D., Roe B.A.;
RT   "The Medicago genome provides insight into the evolution of rhizobial
RT   symbioses.";
RL   Nature 480:520-524(2011).
RN   [2] {ECO:0000313|EMBL:AES70797.1, ECO:0000313|Proteomes:UP000002051}
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Jemalong A17 {ECO:0000313|EnsemblPlants:AES70797,
RC   ECO:0000313|Proteomes:UP000002051};
RX   PubMed=24767513; DOI=10.1186/1471-2164-15-312;
RA   Tang H., Krishnakumar V., Bidwell S., Rosen B., Chan A., Zhou S.,
RA   Gentzbittel L., Childs K.L., Yandell M., Gundlach H., Mayer K.F.,
RA   Schwartz D.C., Town C.D.;
RT   "An improved genome release (version Mt4.0) for the model legume Medicago
RT   truncatula.";
RL   BMC Genomics 15:312-312(2014).
RN   [3] {ECO:0000313|EnsemblPlants:AES70797}
RP   IDENTIFICATION.
RC   STRAIN=cv. Jemalong A17 {ECO:0000313|EnsemblPlants:AES70797};
RG   EnsemblPlants;
RL   Submitted (APR-2015) to UniProtKB.
RN   [4] {ECO:0000313|EMBL:RHN67941.1}
RP   NUCLEOTIDE SEQUENCE.
RC   TISSUE=Leaves {ECO:0000313|EMBL:RHN67941.1};
RA   Pecrix Y., Gamas P., Carrere S.;
RT   "Whole-genome landscape of Medicago truncatula symbiotic genes.";
RL   Nat. Plants 0:0-0(2018).
CC   -!- SIMILARITY: Belongs to the eukaryotic-type primase small subunit
CC       family. {ECO:0000256|ARBA:ARBA00009762, ECO:0000256|RuleBase:RU003514}.
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DR   EMBL; CM001219; AES70797.1; -; Genomic_DNA.
DR   EMBL; PSQE01000003; RHN67941.1; -; Genomic_DNA.
DR   RefSeq; XP_003600546.1; XM_003600498.2.
DR   AlphaFoldDB; G7IV46; -.
DR   STRING; 3880.G7IV46; -.
DR   PaxDb; 3880-AES70797; -.
DR   EnsemblPlants; AES70797; AES70797; MTR_3g062490.
DR   GeneID; 11439115; -.
DR   Gramene; AES70797; AES70797; MTR_3g062490.
DR   KEGG; mtr:11439115; -.
DR   eggNOG; KOG2851; Eukaryota.
DR   HOGENOM; CLU_028288_3_2_1; -.
DR   OMA; NVTRGFN; -.
DR   OrthoDB; 168741at2759; -.
DR   Proteomes; UP000002051; Chromosome 3.
DR   Proteomes; UP000265566; Chromosome 3.
DR   ExpressionAtlas; G7IV46; differential.
DR   GO; GO:0005658; C:alpha DNA polymerase:primase complex; IBA:GO_Central.
DR   GO; GO:0003896; F:DNA primase activity; IEA:InterPro.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0006269; P:DNA replication, synthesis of RNA primer; IBA:GO_Central.
DR   CDD; cd04860; AE_Prim_S; 1.
DR   Gene3D; 3.90.920.10; DNA primase, PRIM domain; 1.
DR   InterPro; IPR002755; DNA_primase_S.
DR   InterPro; IPR014052; DNA_primase_ssu_euk/arc.
DR   NCBIfam; TIGR00335; primase_sml; 1.
DR   PANTHER; PTHR10536; DNA PRIMASE SMALL SUBUNIT; 1.
DR   PANTHER; PTHR10536:SF0; DNA PRIMASE SMALL SUBUNIT; 1.
DR   Pfam; PF01896; DNA_primase_S; 1.
DR   SUPFAM; SSF56747; Prim-pol domain; 1.
PE   3: Inferred from homology;
KW   DNA replication {ECO:0000256|ARBA:ARBA00022705,
KW   ECO:0000256|RuleBase:RU003514};
KW   DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478,
KW   ECO:0000256|RuleBase:RU003514};
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW   Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW   Primosome {ECO:0000256|ARBA:ARBA00022515, ECO:0000256|RuleBase:RU003514};
KW   Reference proteome {ECO:0000313|Proteomes:UP000002051};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transferase {ECO:0000256|ARBA:ARBA00022679, ECO:0000256|RuleBase:RU003514}.
SQ   SEQUENCE   433 AA;  50082 MW;  1DD0AE95EACAA16C CRC64;
     MIPQQDSEFD SNCLKPYYGK LFPYADIFKW MSYGHDGKHP GCDQSYFGRR EFSFTLNGDF
     YLRFQSYNNA LELEKAIKEK CPLKIDIGPV YTVDPAKRHA YAQSDNNVFT PVERELIFDI
     DMTDYDDVRY CCKGADVCLD CWPLMTIAIK VIDTSLRDDF GFKHILWVYS GRRGVHCWVC
     DGKARRLTNE QRASVADYFR VYKGNENSHK KVSLMGAALH PFLATSYTNV LKDYFEKVLL
     TRQNLLATEE RYEKILSMIP DESIASELRG KWQDSRRSSS AKEDINIVRW EQCKQLLQSG
     KHKSQGLRRC VEEIVFCYTY PRLDMEVSKH MNHLLKAPFC VHPKTGRVCV PIDPNRCDEF
     DPTTVPTVFQ LLEELNNEGL RADVNGERSG TSLGNSVTLF RSSFLEPLQK GSKEEIERSY
     NLKLQQSKNS IGW
//
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