ID G7IZF9_MEDTR Unreviewed; 1125 AA.
AC G7IZF9;
DT 25-JAN-2012, integrated into UniProtKB/TrEMBL.
DT 25-JAN-2012, sequence version 1.
DT 27-MAR-2024, entry version 59.
DE SubName: Full=Pentatricopeptide (PPR) repeat protein {ECO:0000313|EMBL:AES69403.1};
GN OrderedLocusNames=MTR_3g029530 {ECO:0000313|EMBL:AES69403.1};
OS Medicago truncatula (Barrel medic) (Medicago tribuloides).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago.
OX NCBI_TaxID=3880 {ECO:0000313|EMBL:AES69403.1, ECO:0000313|Proteomes:UP000002051};
RN [1] {ECO:0000313|EMBL:AES69403.1, ECO:0000313|Proteomes:UP000002051}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=A17 {ECO:0000313|EMBL:AES69403.1}, and cv. Jemalong A17
RC {ECO:0000313|EnsemblPlants:AES69403,
RC ECO:0000313|Proteomes:UP000002051};
RX PubMed=22089132; DOI=10.1038/nature10625;
RA Young N.D., Debelle F., Oldroyd G.E., Geurts R., Cannon S.B., Udvardi M.K.,
RA Benedito V.A., Mayer K.F., Gouzy J., Schoof H., Van de Peer Y., Proost S.,
RA Cook D.R., Meyers B.C., Spannagl M., Cheung F., De Mita S.,
RA Krishnakumar V., Gundlach H., Zhou S., Mudge J., Bharti A.K., Murray J.D.,
RA Naoumkina M.A., Rosen B., Silverstein K.A., Tang H., Rombauts S.,
RA Zhao P.X., Zhou P., Barbe V., Bardou P., Bechner M., Bellec A., Berger A.,
RA Berges H., Bidwell S., Bisseling T., Choisne N., Couloux A., Denny R.,
RA Deshpande S., Dai X., Doyle J.J., Dudez A.M., Farmer A.D., Fouteau S.,
RA Franken C., Gibelin C., Gish J., Goldstein S., Gonzalez A.J., Green P.J.,
RA Hallab A., Hartog M., Hua A., Humphray S.J., Jeong D.H., Jing Y.,
RA Jocker A., Kenton S.M., Kim D.J., Klee K., Lai H., Lang C., Lin S.,
RA Macmil S.L., Magdelenat G., Matthews L., McCorrison J., Monaghan E.L.,
RA Mun J.H., Najar F.Z., Nicholson C., Noirot C., O'Bleness M., Paule C.R.,
RA Poulain J., Prion F., Qin B., Qu C., Retzel E.F., Riddle C., Sallet E.,
RA Samain S., Samson N., Sanders I., Saurat O., Scarpelli C., Schiex T.,
RA Segurens B., Severin A.J., Sherrier D.J., Shi R., Sims S., Singer S.R.,
RA Sinharoy S., Sterck L., Viollet A., Wang B.B., Wang K., Wang M., Wang X.,
RA Warfsmann J., Weissenbach J., White D.D., White J.D., Wiley G.B.,
RA Wincker P., Xing Y., Yang L., Yao Z., Ying F., Zhai J., Zhou L., Zuber A.,
RA Denarie J., Dixon R.A., May G.D., Schwartz D.C., Rogers J., Quetier F.,
RA Town C.D., Roe B.A.;
RT "The Medicago genome provides insight into the evolution of rhizobial
RT symbioses.";
RL Nature 480:520-524(2011).
RN [2] {ECO:0000313|EMBL:AES69403.1, ECO:0000313|Proteomes:UP000002051}
RP GENOME REANNOTATION.
RC STRAIN=cv. Jemalong A17 {ECO:0000313|EnsemblPlants:AES69403,
RC ECO:0000313|Proteomes:UP000002051};
RX PubMed=24767513; DOI=10.1186/1471-2164-15-312;
RA Tang H., Krishnakumar V., Bidwell S., Rosen B., Chan A., Zhou S.,
RA Gentzbittel L., Childs K.L., Yandell M., Gundlach H., Mayer K.F.,
RA Schwartz D.C., Town C.D.;
RT "An improved genome release (version Mt4.0) for the model legume Medicago
RT truncatula.";
RL BMC Genomics 15:312-312(2014).
RN [3] {ECO:0000313|EnsemblPlants:AES69403}
RP IDENTIFICATION.
RC STRAIN=cv. Jemalong A17 {ECO:0000313|EnsemblPlants:AES69403};
RG EnsemblPlants;
RL Submitted (APR-2015) to UniProtKB.
CC -!- SIMILARITY: Belongs to the PPR family. PCMP-H subfamily.
CC {ECO:0000256|ARBA:ARBA00006643}.
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DR EMBL; CM001219; AES69403.1; -; Genomic_DNA.
DR RefSeq; XP_003599152.1; XM_003599104.1.
DR AlphaFoldDB; G7IZF9; -.
DR PaxDb; 3880-AES69403; -.
DR EnsemblPlants; AES69403; AES69403; MTR_3g029530.
DR Gramene; AES69403; AES69403; MTR_3g029530.
DR eggNOG; KOG4197; Eukaryota.
DR eggNOG; KOG4665; Eukaryota.
DR HOGENOM; CLU_002706_15_0_1; -.
DR OMA; CSLMSVC; -.
DR Proteomes; UP000002051; Chromosome 3.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 7.
DR InterPro; IPR032867; DYW_dom.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 4.
DR PANTHER; PTHR47928; REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED; 1.
DR PANTHER; PTHR47928:SF199; TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN; 1.
DR Pfam; PF14432; DYW_deaminase; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 9.
DR Pfam; PF13041; PPR_2; 2.
DR Pfam; PF13812; PPR_3; 1.
DR PROSITE; PS51375; PPR; 6.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000002051};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 212..246
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 314..348
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 486..520
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 615..649
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 717..751
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 818..852
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 1033..1125
FT /note="DYW"
FT /evidence="ECO:0000259|Pfam:PF14432"
SQ SEQUENCE 1125 AA; 126528 MW; D7E077B472B10CB4 CRC64;
MNVLLCYINT LIYDISVVEV GQHFYWQIGD FQVHAQGLEF VEFEARNGNT RIASRKRNCG
LKNTFFAVLS HKCRLFVLSC LLPWLGLLQL LELARNCRTL CTLNVVHAPP TPYSPLLNCQ
NQLETCVKEN EFLSYGIHTF IRNHSNPQVS RFLQKGFSEI SEGNVGKALH ALCVKDVIQQ
NTFYTNTLVN MYSKFGSIKY AQHVFDKMYD RNDASWNNMI SGFVRVGWYH KAMQFFCHMF
ENGVTPSSYV IASMVTACDR SGCMTEGARQ IHGYVVKCGL MSNVFVGTSL LHFYGTHGSV
SEANKLFEEI EEPNIVSWTS LMVCYADNGH TKEVLNIYRH LRHNGLICTG NTMATVIRTC
GMFGDKTMGY QILGDVIKSG LDTSSVSVAN SLISMFGNYD SVEEASRVFN NMQERDTISW
NSIITASAHN GRFEESLGHF FWMRRTHPKT DYITISALLP ACGSAQHLKW GRGLHGLITK
SGLESNVCVC NSLLSMYAQA GSSEDAELVF HTMPARDLIS WNSMMASHVE DGKYSHAILL
LVEMLKTRKA MNYVTFTTAL SACYNLEKLK IVHAFVIHFA VHHNLIIGNT LVTMYGKFGL
MDEAQKVCKI MPERDVVTWN ALIGGHADDK DPNATIQAFN LMRREGLLSN YITIVNLLGT
CMSPDYLLKH GMPIHAHIVV AGFELDTYVQ SSLITMYAQC GDLNTSSYIF DVLANKNSST
WNAIFSANAH YGPGEEALKF IARMRNDGVD LDQFSFSVAL ATIGNLTVLD EGQQLHSWII
KLGFELDEYV LNATMDMYGK CGEIDDVFRI LPIPKIRSKR SWNILISALA RHGFFRQATE
AFHEMLDLGL KPDHVTFVSL LSACSHGGLV DEGLVYFSSM TSEFGVPTAI EHCVCIIDLL
GRSGRLAEAE GFIDKMPVPP NEFVWRSLLA ACKVHGNLEL GRKAADRLFE LNSSDDSAYV
LYSNVCASTQ RWGDVENVRK QMESQSLKKK PACSWIKLKN KVMTFGMGDQ FHPQSAQIYA
KLEELRKMTR EEGHMPDTSY ALQDTDEEQK EHNLWNHSER IALAFGLINS AEGSPLRIFK
NLRVCGDCHS VFKLVSKIVG RKIVVRDSYR FHHFHGGKCS CSDYW
//
