ID G7J2D7_MEDTR Unreviewed; 1267 AA.
AC G7J2D7;
DT 25-JAN-2012, integrated into UniProtKB/TrEMBL.
DT 25-JAN-2012, sequence version 1.
DT 24-JAN-2024, entry version 57.
DE SubName: Full=Chromatin remodeling complex subunit {ECO:0000313|EMBL:AES71242.1};
GN Name=11408204 {ECO:0000313|EnsemblPlants:AES71242};
GN OrderedLocusNames=MTR_3g071860 {ECO:0000313|EMBL:AES71242.1};
OS Medicago truncatula (Barrel medic) (Medicago tribuloides).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago.
OX NCBI_TaxID=3880 {ECO:0000313|EMBL:AES71242.1, ECO:0000313|Proteomes:UP000002051};
RN [1] {ECO:0000313|EMBL:AES71242.1, ECO:0000313|Proteomes:UP000002051}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=A17 {ECO:0000313|EMBL:AES71242.1}, and cv. Jemalong A17
RC {ECO:0000313|EnsemblPlants:AES71242,
RC ECO:0000313|Proteomes:UP000002051};
RX PubMed=22089132; DOI=10.1038/nature10625;
RA Young N.D., Debelle F., Oldroyd G.E., Geurts R., Cannon S.B., Udvardi M.K.,
RA Benedito V.A., Mayer K.F., Gouzy J., Schoof H., Van de Peer Y., Proost S.,
RA Cook D.R., Meyers B.C., Spannagl M., Cheung F., De Mita S.,
RA Krishnakumar V., Gundlach H., Zhou S., Mudge J., Bharti A.K., Murray J.D.,
RA Naoumkina M.A., Rosen B., Silverstein K.A., Tang H., Rombauts S.,
RA Zhao P.X., Zhou P., Barbe V., Bardou P., Bechner M., Bellec A., Berger A.,
RA Berges H., Bidwell S., Bisseling T., Choisne N., Couloux A., Denny R.,
RA Deshpande S., Dai X., Doyle J.J., Dudez A.M., Farmer A.D., Fouteau S.,
RA Franken C., Gibelin C., Gish J., Goldstein S., Gonzalez A.J., Green P.J.,
RA Hallab A., Hartog M., Hua A., Humphray S.J., Jeong D.H., Jing Y.,
RA Jocker A., Kenton S.M., Kim D.J., Klee K., Lai H., Lang C., Lin S.,
RA Macmil S.L., Magdelenat G., Matthews L., McCorrison J., Monaghan E.L.,
RA Mun J.H., Najar F.Z., Nicholson C., Noirot C., O'Bleness M., Paule C.R.,
RA Poulain J., Prion F., Qin B., Qu C., Retzel E.F., Riddle C., Sallet E.,
RA Samain S., Samson N., Sanders I., Saurat O., Scarpelli C., Schiex T.,
RA Segurens B., Severin A.J., Sherrier D.J., Shi R., Sims S., Singer S.R.,
RA Sinharoy S., Sterck L., Viollet A., Wang B.B., Wang K., Wang M., Wang X.,
RA Warfsmann J., Weissenbach J., White D.D., White J.D., Wiley G.B.,
RA Wincker P., Xing Y., Yang L., Yao Z., Ying F., Zhai J., Zhou L., Zuber A.,
RA Denarie J., Dixon R.A., May G.D., Schwartz D.C., Rogers J., Quetier F.,
RA Town C.D., Roe B.A.;
RT "The Medicago genome provides insight into the evolution of rhizobial
RT symbioses.";
RL Nature 480:520-524(2011).
RN [2] {ECO:0000313|EMBL:AES71242.1, ECO:0000313|Proteomes:UP000002051}
RP GENOME REANNOTATION.
RC STRAIN=cv. Jemalong A17 {ECO:0000313|EnsemblPlants:AES71242,
RC ECO:0000313|Proteomes:UP000002051};
RX PubMed=24767513; DOI=10.1186/1471-2164-15-312;
RA Tang H., Krishnakumar V., Bidwell S., Rosen B., Chan A., Zhou S.,
RA Gentzbittel L., Childs K.L., Yandell M., Gundlach H., Mayer K.F.,
RA Schwartz D.C., Town C.D.;
RT "An improved genome release (version Mt4.0) for the model legume Medicago
RT truncatula.";
RL BMC Genomics 15:312-312(2014).
RN [3] {ECO:0000313|EnsemblPlants:AES71242}
RP IDENTIFICATION.
RC STRAIN=cv. Jemalong A17 {ECO:0000313|EnsemblPlants:AES71242};
RG EnsemblPlants;
RL Submitted (APR-2015) to UniProtKB.
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DR EMBL; CM001219; AES71242.1; -; Genomic_DNA.
DR RefSeq; XP_003600991.1; XM_003600943.1.
DR AlphaFoldDB; G7J2D7; -.
DR STRING; 3880.G7J2D7; -.
DR PaxDb; 3880-AES71242; -.
DR EnsemblPlants; AES71242; AES71242; MTR_3g071860.
DR GeneID; 11408204; -.
DR Gramene; AES71242; AES71242; MTR_3g071860.
DR KEGG; mtr:11408204; -.
DR eggNOG; KOG0390; Eukaryota.
DR HOGENOM; CLU_002499_0_0_1; -.
DR OrthoDB; 937291at2759; -.
DR Proteomes; UP000002051; Chromosome 3.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0140658; F:ATP-dependent chromatin remodeler activity; IEA:InterPro.
DR GO; GO:0080188; P:gene silencing by RNA-directed DNA methylation; IEA:InterPro.
DR CDD; cd18007; DEXHc_ATRX-like; 1.
DR CDD; cd18793; SF2_C_SNF; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.40.50.10810; Tandem AAA-ATPase domain; 1.
DR InterPro; IPR044567; CLSY/DRD1.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR032001; SAWADEE_dom.
DR InterPro; IPR038718; SNF2-like_sf.
DR InterPro; IPR000330; SNF2_N.
DR PANTHER; PTHR45821:SF2; SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2; 1.
DR PANTHER; PTHR45821; SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF16719; SAWADEE; 1.
DR Pfam; PF00176; SNF2-rel_dom; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000002051}.
FT DOMAIN 706..909
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 1073..1234
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 273..293
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 506..544
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 625..649
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 513..536
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1267 AA; 146216 MW; B63B88C33CCFF004 CRC64;
MAPIKRHLHQ WKHPFDSNYP FEAVFNGSWQ PVELLKIESG KTTLRFIDTE QIQSTLSSDI
RIRSRKATSS DCSSFLRPGI DISMLLGYRY NDNSDQFRSI PMWIDARINS IHRQPHKSDQ
CSCQFYVNFY DDQGSLGTEV KTLNKEVNAI GMDQIFILQR LQHNTCEGLL KENDTSEIKP
YRWDSSEDCS SLSQSRLLVG KFSSDLSWFV ITSFLKKVSF HIRSVQNKIV YQVMGNDTDI
ISPWLINVVN FSLKKESLVP IVSQFDVFYD YDGEEDEAPP NPSNEVEGLR RSKRRNVQPE
RYVGCVVEKL EVGNFRTCPY KRTTYMIEDE NSSSDSEEDG GKSDQKVNKV NHCKAINVNT
RNKNDDGDGK FKVHKTDDIS SKYHYLTNYI SSAKKNGADV LNLEYGNEPT TISSDEEVDG
NVTLRDYNSF FKEKIKRKRL HVVDDMDFET KWEGIHFKKG APTENFHSSY LSNRSHVHEE
QDHKGGRTFN ADARKEIIDS YMKNFDSLPT EEEPTVNENR KETSMLEKKE EEKVSKSDDE
EENADDLDAL WEEMNTALTS SYLLDGTAGS SSEVVADTKK EFNESCEHDY RLDEEIGIYC
LRCGFVKTAI RDISEPFVEC PKRYKEEKQC SEENKEHKSE PKVDEDYNND MFSTHVTDPD
EPLTNEIDNV WELIPELEEK MHEHQKKAFE FLWQNIAGSM EPSLMEEKSN SSGGCVISHA
PGAGKTFLII SFLVSYLKLF PGKRPLVLAP KTTLYTWRKE FKKWKISVPV YLIHGRRTSP
GSSSTTPKSM ILPGFPRPSS DVKHVLDCLS KIQKWHSHPS VLVMGYTSFL QLMRSKDTKF
EHRKYMAKAL RESPGILILD EGHNPRSTKS RLRKCLMKLP TELRILLSGT LFQNNFCEYF
NTLCLARPKF VHEVLQELDS KYRRKGGKIA KKERHLLEAR ARKFFLNNIE KKINSDIDEE
KMQGLYVLRK ITSSFIDVYD SGNSSETLPG LQIYTLLMNT SDEQHEIVQK LQKKMAESTS
YPLEVELLIT LGSIHPWLIK TAASCATKFF AEEELKKLEI SKFDLRKSSK VRFVLSLISR
VVKNEKVLIF CHNLAPVRFL IELFEKYFQW QNGKEIMVLT GELDLFERGK VIDKFEDQSS
GSKILLASIN ACAEGISLTA ASRVIFLDSE WNPSKTKQAI ARAFRPGQQK MVYVYQLLTT
GSMEEDKYRR TTWKEWVSCM IFSEEFVEDP SKWQAEKIED DILREMVEED KSKAIHMIMK
NEKASTI
//