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Database: UniProt
Entry: G7J2D7_MEDTR
LinkDB: G7J2D7_MEDTR
Original site: G7J2D7_MEDTR 
ID   G7J2D7_MEDTR            Unreviewed;      1267 AA.
AC   G7J2D7;
DT   25-JAN-2012, integrated into UniProtKB/TrEMBL.
DT   25-JAN-2012, sequence version 1.
DT   24-JAN-2024, entry version 57.
DE   SubName: Full=Chromatin remodeling complex subunit {ECO:0000313|EMBL:AES71242.1};
GN   Name=11408204 {ECO:0000313|EnsemblPlants:AES71242};
GN   OrderedLocusNames=MTR_3g071860 {ECO:0000313|EMBL:AES71242.1};
OS   Medicago truncatula (Barrel medic) (Medicago tribuloides).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC   NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago.
OX   NCBI_TaxID=3880 {ECO:0000313|EMBL:AES71242.1, ECO:0000313|Proteomes:UP000002051};
RN   [1] {ECO:0000313|EMBL:AES71242.1, ECO:0000313|Proteomes:UP000002051}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=A17 {ECO:0000313|EMBL:AES71242.1}, and cv. Jemalong A17
RC   {ECO:0000313|EnsemblPlants:AES71242,
RC   ECO:0000313|Proteomes:UP000002051};
RX   PubMed=22089132; DOI=10.1038/nature10625;
RA   Young N.D., Debelle F., Oldroyd G.E., Geurts R., Cannon S.B., Udvardi M.K.,
RA   Benedito V.A., Mayer K.F., Gouzy J., Schoof H., Van de Peer Y., Proost S.,
RA   Cook D.R., Meyers B.C., Spannagl M., Cheung F., De Mita S.,
RA   Krishnakumar V., Gundlach H., Zhou S., Mudge J., Bharti A.K., Murray J.D.,
RA   Naoumkina M.A., Rosen B., Silverstein K.A., Tang H., Rombauts S.,
RA   Zhao P.X., Zhou P., Barbe V., Bardou P., Bechner M., Bellec A., Berger A.,
RA   Berges H., Bidwell S., Bisseling T., Choisne N., Couloux A., Denny R.,
RA   Deshpande S., Dai X., Doyle J.J., Dudez A.M., Farmer A.D., Fouteau S.,
RA   Franken C., Gibelin C., Gish J., Goldstein S., Gonzalez A.J., Green P.J.,
RA   Hallab A., Hartog M., Hua A., Humphray S.J., Jeong D.H., Jing Y.,
RA   Jocker A., Kenton S.M., Kim D.J., Klee K., Lai H., Lang C., Lin S.,
RA   Macmil S.L., Magdelenat G., Matthews L., McCorrison J., Monaghan E.L.,
RA   Mun J.H., Najar F.Z., Nicholson C., Noirot C., O'Bleness M., Paule C.R.,
RA   Poulain J., Prion F., Qin B., Qu C., Retzel E.F., Riddle C., Sallet E.,
RA   Samain S., Samson N., Sanders I., Saurat O., Scarpelli C., Schiex T.,
RA   Segurens B., Severin A.J., Sherrier D.J., Shi R., Sims S., Singer S.R.,
RA   Sinharoy S., Sterck L., Viollet A., Wang B.B., Wang K., Wang M., Wang X.,
RA   Warfsmann J., Weissenbach J., White D.D., White J.D., Wiley G.B.,
RA   Wincker P., Xing Y., Yang L., Yao Z., Ying F., Zhai J., Zhou L., Zuber A.,
RA   Denarie J., Dixon R.A., May G.D., Schwartz D.C., Rogers J., Quetier F.,
RA   Town C.D., Roe B.A.;
RT   "The Medicago genome provides insight into the evolution of rhizobial
RT   symbioses.";
RL   Nature 480:520-524(2011).
RN   [2] {ECO:0000313|EMBL:AES71242.1, ECO:0000313|Proteomes:UP000002051}
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Jemalong A17 {ECO:0000313|EnsemblPlants:AES71242,
RC   ECO:0000313|Proteomes:UP000002051};
RX   PubMed=24767513; DOI=10.1186/1471-2164-15-312;
RA   Tang H., Krishnakumar V., Bidwell S., Rosen B., Chan A., Zhou S.,
RA   Gentzbittel L., Childs K.L., Yandell M., Gundlach H., Mayer K.F.,
RA   Schwartz D.C., Town C.D.;
RT   "An improved genome release (version Mt4.0) for the model legume Medicago
RT   truncatula.";
RL   BMC Genomics 15:312-312(2014).
RN   [3] {ECO:0000313|EnsemblPlants:AES71242}
RP   IDENTIFICATION.
RC   STRAIN=cv. Jemalong A17 {ECO:0000313|EnsemblPlants:AES71242};
RG   EnsemblPlants;
RL   Submitted (APR-2015) to UniProtKB.
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DR   EMBL; CM001219; AES71242.1; -; Genomic_DNA.
DR   RefSeq; XP_003600991.1; XM_003600943.1.
DR   AlphaFoldDB; G7J2D7; -.
DR   STRING; 3880.G7J2D7; -.
DR   PaxDb; 3880-AES71242; -.
DR   EnsemblPlants; AES71242; AES71242; MTR_3g071860.
DR   GeneID; 11408204; -.
DR   Gramene; AES71242; AES71242; MTR_3g071860.
DR   KEGG; mtr:11408204; -.
DR   eggNOG; KOG0390; Eukaryota.
DR   HOGENOM; CLU_002499_0_0_1; -.
DR   OrthoDB; 937291at2759; -.
DR   Proteomes; UP000002051; Chromosome 3.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0140658; F:ATP-dependent chromatin remodeler activity; IEA:InterPro.
DR   GO; GO:0080188; P:gene silencing by RNA-directed DNA methylation; IEA:InterPro.
DR   CDD; cd18007; DEXHc_ATRX-like; 1.
DR   CDD; cd18793; SF2_C_SNF; 1.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR   Gene3D; 3.40.50.10810; Tandem AAA-ATPase domain; 1.
DR   InterPro; IPR044567; CLSY/DRD1.
DR   InterPro; IPR014001; Helicase_ATP-bd.
DR   InterPro; IPR001650; Helicase_C.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR032001; SAWADEE_dom.
DR   InterPro; IPR038718; SNF2-like_sf.
DR   InterPro; IPR000330; SNF2_N.
DR   PANTHER; PTHR45821:SF2; SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2; 1.
DR   PANTHER; PTHR45821; SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED; 1.
DR   Pfam; PF00271; Helicase_C; 1.
DR   Pfam; PF16719; SAWADEE; 1.
DR   Pfam; PF00176; SNF2-rel_dom; 1.
DR   SMART; SM00487; DEXDc; 1.
DR   SMART; SM00490; HELICc; 1.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR   PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR   PROSITE; PS51194; HELICASE_CTER; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000002051}.
FT   DOMAIN          706..909
FT                   /note="Helicase ATP-binding"
FT                   /evidence="ECO:0000259|PROSITE:PS51192"
FT   DOMAIN          1073..1234
FT                   /note="Helicase C-terminal"
FT                   /evidence="ECO:0000259|PROSITE:PS51194"
FT   REGION          273..293
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          506..544
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          625..649
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        513..536
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1267 AA;  146216 MW;  B63B88C33CCFF004 CRC64;
     MAPIKRHLHQ WKHPFDSNYP FEAVFNGSWQ PVELLKIESG KTTLRFIDTE QIQSTLSSDI
     RIRSRKATSS DCSSFLRPGI DISMLLGYRY NDNSDQFRSI PMWIDARINS IHRQPHKSDQ
     CSCQFYVNFY DDQGSLGTEV KTLNKEVNAI GMDQIFILQR LQHNTCEGLL KENDTSEIKP
     YRWDSSEDCS SLSQSRLLVG KFSSDLSWFV ITSFLKKVSF HIRSVQNKIV YQVMGNDTDI
     ISPWLINVVN FSLKKESLVP IVSQFDVFYD YDGEEDEAPP NPSNEVEGLR RSKRRNVQPE
     RYVGCVVEKL EVGNFRTCPY KRTTYMIEDE NSSSDSEEDG GKSDQKVNKV NHCKAINVNT
     RNKNDDGDGK FKVHKTDDIS SKYHYLTNYI SSAKKNGADV LNLEYGNEPT TISSDEEVDG
     NVTLRDYNSF FKEKIKRKRL HVVDDMDFET KWEGIHFKKG APTENFHSSY LSNRSHVHEE
     QDHKGGRTFN ADARKEIIDS YMKNFDSLPT EEEPTVNENR KETSMLEKKE EEKVSKSDDE
     EENADDLDAL WEEMNTALTS SYLLDGTAGS SSEVVADTKK EFNESCEHDY RLDEEIGIYC
     LRCGFVKTAI RDISEPFVEC PKRYKEEKQC SEENKEHKSE PKVDEDYNND MFSTHVTDPD
     EPLTNEIDNV WELIPELEEK MHEHQKKAFE FLWQNIAGSM EPSLMEEKSN SSGGCVISHA
     PGAGKTFLII SFLVSYLKLF PGKRPLVLAP KTTLYTWRKE FKKWKISVPV YLIHGRRTSP
     GSSSTTPKSM ILPGFPRPSS DVKHVLDCLS KIQKWHSHPS VLVMGYTSFL QLMRSKDTKF
     EHRKYMAKAL RESPGILILD EGHNPRSTKS RLRKCLMKLP TELRILLSGT LFQNNFCEYF
     NTLCLARPKF VHEVLQELDS KYRRKGGKIA KKERHLLEAR ARKFFLNNIE KKINSDIDEE
     KMQGLYVLRK ITSSFIDVYD SGNSSETLPG LQIYTLLMNT SDEQHEIVQK LQKKMAESTS
     YPLEVELLIT LGSIHPWLIK TAASCATKFF AEEELKKLEI SKFDLRKSSK VRFVLSLISR
     VVKNEKVLIF CHNLAPVRFL IELFEKYFQW QNGKEIMVLT GELDLFERGK VIDKFEDQSS
     GSKILLASIN ACAEGISLTA ASRVIFLDSE WNPSKTKQAI ARAFRPGQQK MVYVYQLLTT
     GSMEEDKYRR TTWKEWVSCM IFSEEFVEDP SKWQAEKIED DILREMVEED KSKAIHMIMK
     NEKASTI
//
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