ID G7JWU3_MEDTR Unreviewed; 604 AA.
AC G7JWU3; A0A0C3XJ32;
DT 25-JAN-2012, integrated into UniProtKB/TrEMBL.
DT 01-OCT-2014, sequence version 2.
DT 24-JAN-2024, entry version 64.
DE SubName: Full=PPR containing plant protein {ECO:0000313|EMBL:AES97018.2};
DE SubName: Full=Putative pentatricopeptide {ECO:0000313|EMBL:RHN55547.1};
GN Name=11408928 {ECO:0000313|EnsemblPlants:AES97018};
GN OrderedLocusNames=MTR_5g044270 {ECO:0000313|EMBL:AES97018.2};
GN ORFNames=MtrunA17_Chr5g0419041 {ECO:0000313|EMBL:RHN55547.1};
OS Medicago truncatula (Barrel medic) (Medicago tribuloides).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago.
OX NCBI_TaxID=3880 {ECO:0000313|EMBL:AES97018.2, ECO:0000313|Proteomes:UP000002051};
RN [1] {ECO:0000313|EMBL:AES97018.2, ECO:0000313|Proteomes:UP000002051}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=A17 {ECO:0000313|EMBL:AES97018.2}, and cv. Jemalong A17
RC {ECO:0000313|EnsemblPlants:AES97018,
RC ECO:0000313|Proteomes:UP000002051};
RX PubMed=22089132; DOI=10.1038/nature10625;
RA Young N.D., Debelle F., Oldroyd G.E., Geurts R., Cannon S.B., Udvardi M.K.,
RA Benedito V.A., Mayer K.F., Gouzy J., Schoof H., Van de Peer Y., Proost S.,
RA Cook D.R., Meyers B.C., Spannagl M., Cheung F., De Mita S.,
RA Krishnakumar V., Gundlach H., Zhou S., Mudge J., Bharti A.K., Murray J.D.,
RA Naoumkina M.A., Rosen B., Silverstein K.A., Tang H., Rombauts S.,
RA Zhao P.X., Zhou P., Barbe V., Bardou P., Bechner M., Bellec A., Berger A.,
RA Berges H., Bidwell S., Bisseling T., Choisne N., Couloux A., Denny R.,
RA Deshpande S., Dai X., Doyle J.J., Dudez A.M., Farmer A.D., Fouteau S.,
RA Franken C., Gibelin C., Gish J., Goldstein S., Gonzalez A.J., Green P.J.,
RA Hallab A., Hartog M., Hua A., Humphray S.J., Jeong D.H., Jing Y.,
RA Jocker A., Kenton S.M., Kim D.J., Klee K., Lai H., Lang C., Lin S.,
RA Macmil S.L., Magdelenat G., Matthews L., McCorrison J., Monaghan E.L.,
RA Mun J.H., Najar F.Z., Nicholson C., Noirot C., O'Bleness M., Paule C.R.,
RA Poulain J., Prion F., Qin B., Qu C., Retzel E.F., Riddle C., Sallet E.,
RA Samain S., Samson N., Sanders I., Saurat O., Scarpelli C., Schiex T.,
RA Segurens B., Severin A.J., Sherrier D.J., Shi R., Sims S., Singer S.R.,
RA Sinharoy S., Sterck L., Viollet A., Wang B.B., Wang K., Wang M., Wang X.,
RA Warfsmann J., Weissenbach J., White D.D., White J.D., Wiley G.B.,
RA Wincker P., Xing Y., Yang L., Yao Z., Ying F., Zhai J., Zhou L., Zuber A.,
RA Denarie J., Dixon R.A., May G.D., Schwartz D.C., Rogers J., Quetier F.,
RA Town C.D., Roe B.A.;
RT "The Medicago genome provides insight into the evolution of rhizobial
RT symbioses.";
RL Nature 480:520-524(2011).
RN [2] {ECO:0000313|EMBL:AES97018.2, ECO:0000313|Proteomes:UP000002051}
RP GENOME REANNOTATION.
RC STRAIN=cv. Jemalong A17 {ECO:0000313|EnsemblPlants:AES97018,
RC ECO:0000313|Proteomes:UP000002051};
RX PubMed=24767513; DOI=10.1186/1471-2164-15-312;
RA Tang H., Krishnakumar V., Bidwell S., Rosen B., Chan A., Zhou S.,
RA Gentzbittel L., Childs K.L., Yandell M., Gundlach H., Mayer K.F.,
RA Schwartz D.C., Town C.D.;
RT "An improved genome release (version Mt4.0) for the model legume Medicago
RT truncatula.";
RL BMC Genomics 15:312-312(2014).
RN [3] {ECO:0000313|EnsemblPlants:AES97018}
RP IDENTIFICATION.
RC STRAIN=cv. Jemalong A17 {ECO:0000313|EnsemblPlants:AES97018};
RG EnsemblPlants;
RL Submitted (APR-2015) to UniProtKB.
RN [4] {ECO:0000313|Proteomes:UP000265566}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Jemalong A17 {ECO:0000313|Proteomes:UP000265566};
RX PubMed=30397259; DOI=10.1038/s41477-018-0286-7;
RA Pecrix Y., Staton S.E., Sallet E., Lelandais-Briere C., Moreau S.,
RA Carrere S., Blein T., Jardinaud M.F., Latrasse D., Zouine M., Zahm M.,
RA Kreplak J., Mayjonade B., Satge C., Perez M., Cauet S., Marande W.,
RA Chantry-Darmon C., Lopez-Roques C., Bouchez O., Berard A., Debelle F.,
RA Munos S., Bendahmane A., Berges H., Niebel A., Buitink J., Frugier F.,
RA Benhamed M., Crespi M., Gouzy J., Gamas P.;
RT "Whole-genome landscape of Medicago truncatula symbiotic genes.";
RL Nat. Plants 4:1017-1025(2018).
RN [5] {ECO:0000313|EMBL:RHN55547.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaves {ECO:0000313|EMBL:RHN55547.1};
RA Pecrix Y., Gamas P., Carrere S.;
RT "Whole-genome landscape of Medicago truncatula symbiotic genes.";
RL Nat. Plants 0:0-0(2018).
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DR EMBL; CM001221; AES97018.2; -; Genomic_DNA.
DR EMBL; PSQE01000005; RHN55547.1; -; Genomic_DNA.
DR RefSeq; XP_003614060.2; XM_003614012.2.
DR AlphaFoldDB; G7JWU3; -.
DR STRING; 3880.G7JWU3; -.
DR PaxDb; 3880-AES97018; -.
DR EnsemblPlants; AES97018; AES97018; MTR_5g044270.
DR GeneID; 11408928; -.
DR Gramene; AES97018; AES97018; MTR_5g044270.
DR KEGG; mtr:11408928; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_22_1; -.
DR OrthoDB; 1212810at2759; -.
DR Proteomes; UP000002051; Chromosome 5.
DR Proteomes; UP000265566; Chromosome 5.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 2.
DR InterPro; IPR044605; At1g26460-like.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 2.
DR PANTHER; PTHR47205; OS07G0599000 PROTEIN; 1.
DR PANTHER; PTHR47205:SF1; OS07G0599000 PROTEIN; 1.
DR Pfam; PF13812; PPR_3; 2.
DR PROSITE; PS51375; PPR; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000002051};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 481..515
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 516..550
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REGION 33..60
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 36..52
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 604 AA; 67632 MW; 680D628B19DB6FE7 CRC64;
MASQMSILYR TRSLLTKPNF TIKSISTFPY LNQEPELVDP TPPPPTESSL PPNPASGSPL
YNENWRNPVP KTSSLTQFGH FTRASVSETY DSNALLNVFG DWVASQRWGD VKEMFEGWVR
SLDKNGKPNK PDVNLFNHYI RANLMIGASA ADLLDLLAQM EQFDILPNTA SFNLVLKAMH
QARETLAAEK LLERMLQSGN EAFPDDESFD LVIGMLFATD QIDTAFKYID STLKHGNKLS
MDLFMKCVRS CVKQGRLDTL VAIIEKCRAT DQNKALCPSW KLCIFIAEVA IRADNSKLAY
YGLEFMARWI VKGERARPPV LLSVDEGLAV SALMTAGRTY NSELLGAAWA VLDRSLRKKK
LPNPESYLAK IYALASLGNL QKAFGTLHDY ESAYGNSDQE ADDLFCPFTS LHPLSVACSK
KGFETLDTVY FQLENLSHAE RPYKSVAALN CVIVGSANIW DLDRAYQTFE SIASTFGLTH
NIHSYNGLMY AFGKVNKADE VSKVFGYIVN SGLKPNAKSY CLLIDAHLIN RDVKSAMGVL
DDMIAAGFEP MKGTLKKIRR RCIREFDTES DERLESLALS YNYRMGSEGR RNMLFNLNYS
TEMA
//