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Database: UniProt
Entry: G7JWU3_MEDTR
LinkDB: G7JWU3_MEDTR
Original site: G7JWU3_MEDTR 
ID   G7JWU3_MEDTR            Unreviewed;       604 AA.
AC   G7JWU3; A0A0C3XJ32;
DT   25-JAN-2012, integrated into UniProtKB/TrEMBL.
DT   01-OCT-2014, sequence version 2.
DT   24-JAN-2024, entry version 64.
DE   SubName: Full=PPR containing plant protein {ECO:0000313|EMBL:AES97018.2};
DE   SubName: Full=Putative pentatricopeptide {ECO:0000313|EMBL:RHN55547.1};
GN   Name=11408928 {ECO:0000313|EnsemblPlants:AES97018};
GN   OrderedLocusNames=MTR_5g044270 {ECO:0000313|EMBL:AES97018.2};
GN   ORFNames=MtrunA17_Chr5g0419041 {ECO:0000313|EMBL:RHN55547.1};
OS   Medicago truncatula (Barrel medic) (Medicago tribuloides).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC   NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago.
OX   NCBI_TaxID=3880 {ECO:0000313|EMBL:AES97018.2, ECO:0000313|Proteomes:UP000002051};
RN   [1] {ECO:0000313|EMBL:AES97018.2, ECO:0000313|Proteomes:UP000002051}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=A17 {ECO:0000313|EMBL:AES97018.2}, and cv. Jemalong A17
RC   {ECO:0000313|EnsemblPlants:AES97018,
RC   ECO:0000313|Proteomes:UP000002051};
RX   PubMed=22089132; DOI=10.1038/nature10625;
RA   Young N.D., Debelle F., Oldroyd G.E., Geurts R., Cannon S.B., Udvardi M.K.,
RA   Benedito V.A., Mayer K.F., Gouzy J., Schoof H., Van de Peer Y., Proost S.,
RA   Cook D.R., Meyers B.C., Spannagl M., Cheung F., De Mita S.,
RA   Krishnakumar V., Gundlach H., Zhou S., Mudge J., Bharti A.K., Murray J.D.,
RA   Naoumkina M.A., Rosen B., Silverstein K.A., Tang H., Rombauts S.,
RA   Zhao P.X., Zhou P., Barbe V., Bardou P., Bechner M., Bellec A., Berger A.,
RA   Berges H., Bidwell S., Bisseling T., Choisne N., Couloux A., Denny R.,
RA   Deshpande S., Dai X., Doyle J.J., Dudez A.M., Farmer A.D., Fouteau S.,
RA   Franken C., Gibelin C., Gish J., Goldstein S., Gonzalez A.J., Green P.J.,
RA   Hallab A., Hartog M., Hua A., Humphray S.J., Jeong D.H., Jing Y.,
RA   Jocker A., Kenton S.M., Kim D.J., Klee K., Lai H., Lang C., Lin S.,
RA   Macmil S.L., Magdelenat G., Matthews L., McCorrison J., Monaghan E.L.,
RA   Mun J.H., Najar F.Z., Nicholson C., Noirot C., O'Bleness M., Paule C.R.,
RA   Poulain J., Prion F., Qin B., Qu C., Retzel E.F., Riddle C., Sallet E.,
RA   Samain S., Samson N., Sanders I., Saurat O., Scarpelli C., Schiex T.,
RA   Segurens B., Severin A.J., Sherrier D.J., Shi R., Sims S., Singer S.R.,
RA   Sinharoy S., Sterck L., Viollet A., Wang B.B., Wang K., Wang M., Wang X.,
RA   Warfsmann J., Weissenbach J., White D.D., White J.D., Wiley G.B.,
RA   Wincker P., Xing Y., Yang L., Yao Z., Ying F., Zhai J., Zhou L., Zuber A.,
RA   Denarie J., Dixon R.A., May G.D., Schwartz D.C., Rogers J., Quetier F.,
RA   Town C.D., Roe B.A.;
RT   "The Medicago genome provides insight into the evolution of rhizobial
RT   symbioses.";
RL   Nature 480:520-524(2011).
RN   [2] {ECO:0000313|EMBL:AES97018.2, ECO:0000313|Proteomes:UP000002051}
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Jemalong A17 {ECO:0000313|EnsemblPlants:AES97018,
RC   ECO:0000313|Proteomes:UP000002051};
RX   PubMed=24767513; DOI=10.1186/1471-2164-15-312;
RA   Tang H., Krishnakumar V., Bidwell S., Rosen B., Chan A., Zhou S.,
RA   Gentzbittel L., Childs K.L., Yandell M., Gundlach H., Mayer K.F.,
RA   Schwartz D.C., Town C.D.;
RT   "An improved genome release (version Mt4.0) for the model legume Medicago
RT   truncatula.";
RL   BMC Genomics 15:312-312(2014).
RN   [3] {ECO:0000313|EnsemblPlants:AES97018}
RP   IDENTIFICATION.
RC   STRAIN=cv. Jemalong A17 {ECO:0000313|EnsemblPlants:AES97018};
RG   EnsemblPlants;
RL   Submitted (APR-2015) to UniProtKB.
RN   [4] {ECO:0000313|Proteomes:UP000265566}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Jemalong A17 {ECO:0000313|Proteomes:UP000265566};
RX   PubMed=30397259; DOI=10.1038/s41477-018-0286-7;
RA   Pecrix Y., Staton S.E., Sallet E., Lelandais-Briere C., Moreau S.,
RA   Carrere S., Blein T., Jardinaud M.F., Latrasse D., Zouine M., Zahm M.,
RA   Kreplak J., Mayjonade B., Satge C., Perez M., Cauet S., Marande W.,
RA   Chantry-Darmon C., Lopez-Roques C., Bouchez O., Berard A., Debelle F.,
RA   Munos S., Bendahmane A., Berges H., Niebel A., Buitink J., Frugier F.,
RA   Benhamed M., Crespi M., Gouzy J., Gamas P.;
RT   "Whole-genome landscape of Medicago truncatula symbiotic genes.";
RL   Nat. Plants 4:1017-1025(2018).
RN   [5] {ECO:0000313|EMBL:RHN55547.1}
RP   NUCLEOTIDE SEQUENCE.
RC   TISSUE=Leaves {ECO:0000313|EMBL:RHN55547.1};
RA   Pecrix Y., Gamas P., Carrere S.;
RT   "Whole-genome landscape of Medicago truncatula symbiotic genes.";
RL   Nat. Plants 0:0-0(2018).
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DR   EMBL; CM001221; AES97018.2; -; Genomic_DNA.
DR   EMBL; PSQE01000005; RHN55547.1; -; Genomic_DNA.
DR   RefSeq; XP_003614060.2; XM_003614012.2.
DR   AlphaFoldDB; G7JWU3; -.
DR   STRING; 3880.G7JWU3; -.
DR   PaxDb; 3880-AES97018; -.
DR   EnsemblPlants; AES97018; AES97018; MTR_5g044270.
DR   GeneID; 11408928; -.
DR   Gramene; AES97018; AES97018; MTR_5g044270.
DR   KEGG; mtr:11408928; -.
DR   eggNOG; KOG4197; Eukaryota.
DR   HOGENOM; CLU_002706_49_22_1; -.
DR   OrthoDB; 1212810at2759; -.
DR   Proteomes; UP000002051; Chromosome 5.
DR   Proteomes; UP000265566; Chromosome 5.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 2.
DR   InterPro; IPR044605; At1g26460-like.
DR   InterPro; IPR002885; Pentatricopeptide_rpt.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   NCBIfam; TIGR00756; PPR; 2.
DR   PANTHER; PTHR47205; OS07G0599000 PROTEIN; 1.
DR   PANTHER; PTHR47205:SF1; OS07G0599000 PROTEIN; 1.
DR   Pfam; PF13812; PPR_3; 2.
DR   PROSITE; PS51375; PPR; 2.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000002051};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT   REPEAT          481..515
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          516..550
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REGION          33..60
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        36..52
FT                   /note="Pro residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   604 AA;  67632 MW;  680D628B19DB6FE7 CRC64;
     MASQMSILYR TRSLLTKPNF TIKSISTFPY LNQEPELVDP TPPPPTESSL PPNPASGSPL
     YNENWRNPVP KTSSLTQFGH FTRASVSETY DSNALLNVFG DWVASQRWGD VKEMFEGWVR
     SLDKNGKPNK PDVNLFNHYI RANLMIGASA ADLLDLLAQM EQFDILPNTA SFNLVLKAMH
     QARETLAAEK LLERMLQSGN EAFPDDESFD LVIGMLFATD QIDTAFKYID STLKHGNKLS
     MDLFMKCVRS CVKQGRLDTL VAIIEKCRAT DQNKALCPSW KLCIFIAEVA IRADNSKLAY
     YGLEFMARWI VKGERARPPV LLSVDEGLAV SALMTAGRTY NSELLGAAWA VLDRSLRKKK
     LPNPESYLAK IYALASLGNL QKAFGTLHDY ESAYGNSDQE ADDLFCPFTS LHPLSVACSK
     KGFETLDTVY FQLENLSHAE RPYKSVAALN CVIVGSANIW DLDRAYQTFE SIASTFGLTH
     NIHSYNGLMY AFGKVNKADE VSKVFGYIVN SGLKPNAKSY CLLIDAHLIN RDVKSAMGVL
     DDMIAAGFEP MKGTLKKIRR RCIREFDTES DERLESLALS YNYRMGSEGR RNMLFNLNYS
     TEMA
//
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