ID G7SQA6_9FLAO Unreviewed; 307 AA.
AC G7SQA6;
DT 25-JAN-2012, integrated into UniProtKB/TrEMBL.
DT 25-JAN-2012, sequence version 1.
DT 24-JAN-2024, entry version 64.
DE SubName: Full=Antitermination protein NusB {ECO:0000313|EMBL:AER40715.1};
GN Name=nusB {ECO:0000313|EMBL:AER40715.1};
GN ORFNames=MADAR_415 {ECO:0000313|EMBL:AER40715.1};
OS Blattabacterium sp. (Mastotermes darwiniensis) str. MADAR.
OC Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales;
OC Blattabacteriaceae; Blattabacterium.
OX NCBI_TaxID=1074889 {ECO:0000313|EMBL:AER40715.1, ECO:0000313|Proteomes:UP000006133};
RN [1] {ECO:0000313|EMBL:AER40715.1, ECO:0000313|Proteomes:UP000006133}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MADAR {ECO:0000313|EMBL:AER40715.1,
RC ECO:0000313|Proteomes:UP000006133};
RX PubMed=22020505; DOI=10.1128/AEM.06540-11;
RA Sabree Z.L., Huang C.Y., Arakawa G., Tokuda G., Lo N., Watanabe H.,
RA Moran N.A.;
RT "Genome shrinkage and loss of nutrient-providing potential in the obligate
RT symbiont of the primitive termite Mastotermes darwiniensis.";
RL Appl. Environ. Microbiol. 0:0-0(2011).
CC -!- SIMILARITY: Belongs to the NusB family.
CC {ECO:0000256|ARBA:ARBA00005952}.
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DR EMBL; CP003000; AER40715.1; -; Genomic_DNA.
DR RefSeq; WP_014158874.1; NC_016146.1.
DR AlphaFoldDB; G7SQA6; -.
DR STRING; 1074889.MADAR_415; -.
DR KEGG; bmm:MADAR_415; -.
DR eggNOG; COG0781; Bacteria.
DR HOGENOM; CLU_058797_0_0_10; -.
DR OrthoDB; 9787568at2; -.
DR Proteomes; UP000006133; Chromosome.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006353; P:DNA-templated transcription termination; IEA:InterPro.
DR GO; GO:0031564; P:transcription antitermination; IEA:UniProtKB-KW.
DR Gene3D; 1.10.940.10; NusB-like; 1.
DR InterPro; IPR035926; NusB-like_sf.
DR InterPro; IPR011605; NusB_fam.
DR InterPro; IPR006027; NusB_RsmB_TIM44.
DR NCBIfam; TIGR01951; nusB; 1.
DR PANTHER; PTHR11078:SF3; ANTITERMINATION NUSB DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR11078; N UTILIZATION SUBSTANCE PROTEIN B-RELATED; 1.
DR Pfam; PF01029; NusB; 1.
DR SUPFAM; SSF48013; NusB-like; 1.
PE 3: Inferred from homology;
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription antitermination {ECO:0000256|ARBA:ARBA00022814};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 194..289
FT /note="NusB/RsmB/TIM44"
FT /evidence="ECO:0000259|Pfam:PF01029"
SQ SEQUENCE 307 AA; 37411 MW; 80E6FACCA694EDDD CRC64;
MSIRRYFRIR SLQFLYAHYL SKMNYEKVEK YMLKSIEESY DLYIFLLYLI LKIREEVINK
KPKISNIYEN KIDTLQKIAY NSVVKILSNY LLQENYEKIL WKKQDEYILF QLIKEIKKSK
YYEIFIQKFN SSFEEDKNFI IKYYKNFFIS NKKLMEYIED KYPISGSENL YLSHRMVCQT
LKSIKLSKNF KLYNNVYQND ENKKFLIDLY RNTISHQEEF NELINDTSKN WDIKRIATID
LIILQMAICE FLYFPNIPPR ATMNEYIEIA KIFCMEKSKM FINGILDKVF KLLNRKNKIF
KIGKGLI
//
