ID G7WJA5_DESOD Unreviewed; 624 AA.
AC G7WJA5;
DT 25-JAN-2012, integrated into UniProtKB/TrEMBL.
DT 25-JAN-2012, sequence version 1.
DT 27-MAR-2024, entry version 66.
DE SubName: Full=PAS domain S-box {ECO:0000313|EMBL:AET69764.1};
GN OrderedLocusNames=Desor_4336 {ECO:0000313|EMBL:AET69764.1};
OS Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM
OS B-1628 / Singapore I) (Desulfotomaculum orientis).
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Desulfitobacteriaceae;
OC Desulfosporosinus.
OX NCBI_TaxID=768706 {ECO:0000313|EMBL:AET69764.1, ECO:0000313|Proteomes:UP000006346};
RN [1] {ECO:0000313|EMBL:AET69764.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 765 {ECO:0000313|EMBL:AET69764.1};
RX PubMed=23105050; DOI=10.1128/JB.01392-12;
RA Pester M., Brambilla E., Alazard D., Rattei T., Weinmaier T., Han J.,
RA Lucas S., Lapidus A., Cheng J.F., Goodwin L., Pitluck S., Peters L.,
RA Ovchinnikova G., Teshima H., Detter J.C., Han C.S., Tapia R., Land M.L.,
RA Hauser L., Kyrpides N.C., Ivanova N.N., Pagani I., Huntmann M., Wei C.L.,
RA Davenport K.W., Daligault H., Chain P.S., Chen A., Mavromatis K.,
RA Markowitz V., Szeto E., Mikhailova N., Pati A., Wagner M., Woyke T.,
RA Ollivier B., Klenk H.P., Spring S., Loy A.;
RT "Complete genome sequences of Desulfosporosinus orientis DSM765T,
RT Desulfosporosinus youngiae DSM17734T, Desulfosporosinus meridiei DSM13257T,
RT and Desulfosporosinus acidiphilus DSM22704T.";
RL J. Bacteriol. 194:6300-6301(2012).
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DR EMBL; CP003108; AET69764.1; -; Genomic_DNA.
DR RefSeq; WP_014186571.1; NC_016584.1.
DR AlphaFoldDB; G7WJA5; -.
DR STRING; 768706.Desor_4336; -.
DR KEGG; dor:Desor_4336; -.
DR PATRIC; fig|768706.3.peg.4399; -.
DR eggNOG; COG3829; Bacteria.
DR eggNOG; COG4936; Bacteria.
DR HOGENOM; CLU_000445_8_1_9; -.
DR OrthoDB; 9803970at2; -.
DR Proteomes; UP000006346; Chromosome.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR CDD; cd00130; PAS; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR002197; HTH_Fis.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR018771; PocR_dom.
DR InterPro; IPR002078; Sigma_54_int.
DR InterPro; IPR025662; Sigma_54_int_dom_ATP-bd_1.
DR InterPro; IPR025943; Sigma_54_int_dom_ATP-bd_2.
DR InterPro; IPR025944; Sigma_54_int_dom_CS.
DR NCBIfam; TIGR00229; sensory_box; 1.
DR PANTHER; PTHR32071:SF57; SIGMA L-DEPENDENT TRANSCRIPTIONAL REGULATOR YQIR-RELATED; 1.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF02954; HTH_8; 1.
DR Pfam; PF13426; PAS_9; 1.
DR Pfam; PF10114; PocR; 1.
DR Pfam; PF00158; Sigma54_activat; 1.
DR PRINTS; PR01590; HTHFIS.
DR SMART; SM00382; AAA; 1.
DR SMART; SM00091; PAS; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR PROSITE; PS50112; PAS; 1.
DR PROSITE; PS00675; SIGMA54_INTERACT_1; 1.
DR PROSITE; PS00676; SIGMA54_INTERACT_2; 1.
DR PROSITE; PS00688; SIGMA54_INTERACT_3; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000006346};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 189..245
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 318..548
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
SQ SEQUENCE 624 AA; 69564 MW; D5F4FA9FC2F4D856 CRC64;
MDFNRKDVNL LDVIDLEFLQ QFQDTFARVT GVAVLTLDKD NNPVTQPINF IDICMKYNRS
CSEGLKRCEI SDKRGAEEST RTGKPAVYHC ENGMMDFAAP IMLNGVRIGA ILGGQVLAKQ
PEKEKYIKHA EVLGVNPHEY LEALNKVQVI PEERIREAAN LLYLVSSKIS KMIENQLRKE
ELQEEKNQAY KLLAAATSSV TEGLMAVDND GKIIHINPAA HAIMGLSDKN IVGKPLSLIL
GPNNKFSEIA RNGLWNTDEE IVLDQGGESI HCTSSSRPIL KENGTIAGVV FTLREMRKVR
RLVNRMVGAT ARFTCEDIIG ESVGMKKAFK LISVAANSLS NVLLTGESGT GKELFAQAIH
NHSGRSEGPF VAVNCAALPR ELIQSELFGY NEGAFTGAKR GGNPGKFELA NEGTIFLDEI
GDMPMELQVN LLRVLQERKV TRVGGEKVIP VNVRIIAATN KDLMKAVEEG RFREDLYYRL
NVLNIHIPPL RERGKDIELL TIHLINIFAE HLGKDINGAE LEFFEIIRNY SWPGNVRELQ
NTVEYAMNVA EGEYLSVTDL PRSIHRQPDF LKEVGKVISL TEIERITVES TLKRFDGNIT
KTAKALGIGR NTLYDKLKKL RVRA
//
