ID G8HKS4_SOYBN Unreviewed; 1245 AA.
AC G8HKS4;
DT 25-JAN-2012, integrated into UniProtKB/TrEMBL.
DT 25-JAN-2012, sequence version 1.
DT 27-MAR-2024, entry version 44.
DE SubName: Full=Chromatin remodeling 38 {ECO:0000313|EMBL:AET79246.1};
GN Name=CHR38 {ECO:0000313|EMBL:AET79246.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EMBL:AET79246.1};
RN [1] {ECO:0000313|EMBL:AET79246.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaves {ECO:0000313|EMBL:AET79246.1};
RX PubMed=15729404; DOI=10.1139/g04-103;
RA Triwitayakorn K., Njiti V.N., Iqbal M.J., Yaegashi S., Town C.,
RA Lightfoot D.A.;
RT "Genomic analysis of a region encompassing QRfs1 and QRfs2: genes that
RT underlie soybean resistance to sudden death syndrome.";
RL Genome 48:125-138(2005).
RN [2] {ECO:0000313|EMBL:AET79246.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaves {ECO:0000313|EMBL:AET79246.1};
RX PubMed=17024428; DOI=10.1007/s00438-006-0150-8;
RA Ruben E., Jamai A., Afzal J., Njiti V.N., Triwitayakorn K., Iqbal M.J.,
RA Yaegashi S., Bashir R., Kazi S., Arelli P., Town C.D., Ishihara H.,
RA Meksem K., Lightfoot D.A.;
RT "Genomic analysis of the rhg1 locus: candidate genes that underlie soybean
RT resistance to the cyst nematode.";
RL Mol. Genet. Genomics 276:503-516(2006).
RN [3] {ECO:0000313|EMBL:AET79246.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaves {ECO:0000313|EMBL:AET79246.1};
RX PubMed=18393610; DOI=10.1094/MPMI-21-5-0507;
RA Afzal A.J., Wood A.J., Lightfoot D.A.;
RT "Plant receptor-like serine threonine kinases: roles in signaling and plant
RT defense.";
RL Mol. Plant Microbe Interact. 21:507-517(2008).
RN [4] {ECO:0000313|EMBL:AET79246.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaves {ECO:0000313|EMBL:AET79246.1};
RX PubMed=22857610; DOI=10.1186/1471-2164-13-368;
RA Srour A., Afzal A.J., Blahut-Beatty L., Hemmati N., Simmonds D.H., Li W.,
RA Liu M., Town C.D., Sharma H., Arelli P., Lightfoot D.A.;
RT "The receptor like kinase at Rhg1-a/Rfs2 caused pleiotropic resistance to
RT sudden death syndrome and soybean cyst nematode as a transgene by altering
RT signaling responses.";
RL BMC Genomics 13:368-368(2012).
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DR EMBL; JN597009; AET79246.1; -; Genomic_DNA.
DR AlphaFoldDB; G8HKS4; -.
DR ExpressionAtlas; G8HKS4; baseline and differential.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0140658; F:ATP-dependent chromatin remodeler activity; IEA:InterPro.
DR GO; GO:0080188; P:gene silencing by RNA-directed DNA methylation; IEA:InterPro.
DR CDD; cd18793; SF2_C_SNF; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.40.50.10810; Tandem AAA-ATPase domain; 1.
DR InterPro; IPR044567; CLSY/DRD1.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR038718; SNF2-like_sf.
DR InterPro; IPR049730; SNF2/RAD54-like_C.
DR InterPro; IPR000330; SNF2_N.
DR PANTHER; PTHR45821:SF2; SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2; 1.
DR PANTHER; PTHR45821; SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF00176; SNF2-rel_dom; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741}.
FT DOMAIN 690..890
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 1051..1220
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 329..358
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 439..473
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 611..648
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 451..466
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1245 AA; 142194 MW; 5A64262D84B4DD62 CRC64;
MEASVLLGNS YGVVARVAVA GLRGGVMAFE AYLSRSWRAV ELIKFESGTT TLYFVDNHHM
TIKKGSFSDV RVRSRKATLS DCSFLRTGID ICVLSASQGN DNSDESSANH VWLDAKINSI
QRKPHNPECS CQYYVNFYVN QGSLGTELRT LRKEVKVVGI NEIAILQKLE RNTCQHKYYR
WESSEDCSKV PHTKLLGKFI SDLSWLVVAS AIRKVSFCAR SVENNIVYQI LGSDATTSSL
YMDSEISVVN FKVNEDGMQM PVIHLVDLFE TDTNTSGDKH DSHYDEVPSS YGFEGLRRSK
RRNIQPERYS DCGNVSEIKV GNVRTWPYKL NKRKDDDGGG EESLPLAQEN SDNSQKVNEL
SSCREIIVYH GRNETLELKS GEANQTQLAS VPLLQEGDSL ALEHHHLNDN VTRRSDAYYS
TPKLKRKRLV DLEADVDFDP GREGINSNKG VSEKRHGSSW YSRSRSHAAE HSYKDRSLNA
TAYKEMIDSY LKDVNRTPTT EEPPVMDQRK EIGNFGQKKE AEIPEREDEE QISEIDMLWR
EMEMALASSY LEETEGSNSA NFAKTTEESN RTCPHDYRLS EEIGIYCYKC GFVKTEIKYI
TPPFIEMQRS VRHQEEKQCN GKDTKEKASK DDDFHLLSTH APTDEHNSME HDNVWKLIPQ
FREKLHDHQK KAFEFLWQNI GGSMEPKLMD AESKRRGGCV ISHAPGAGKT FLIIAFLVSY
LKLFPGKKPL ILAPKGTLYT WCKEFNKWEI SMPVYLIHGR GGTQKDTEQN SIVLPGFPNP
NKYVKHVLDC LQKIKLWQEK PSVLVMSYTA FLALMREGSE FAHRKYMAKA LREGPGILIL
DEGHNPRSTK SRLRKGLMKL KTDLRILLSG TLFQNNFCEY FNTLCLARPK FISEVLDTLD
PITRRKSKTV EKAGHLLESR ARKLFLDKIA KKIDSGIGNE RMQGLNMLRE TTNGFVDVYE
SENFDSAPGL QIYTLLMNTT DKQREILPKL HTRVDECNGY PLELELLVTL GSIHPWLVKT
TSCANKFFTA DQLKQLDKYK YDMKAGSKVK FVLSLVFRVM QREKVLIFCH NLAPVKLLIE
LFEMFFKWKK DREILLLSGE LDLFERGKVI DKFEEHGGAS KVLLASITAC AEGISLTAAS
RVIFLDSEWN PSKTKQAIAR AFRPGQEKMV YVYQLLVTGT LEEDKYKRTT WKEWVSSMIF
SEAFEENLSH SRAVNIEDDI LREMVEEDKS KTIHMILKNE KASTN
//
