ID G9IHB3_ZAMSK Unreviewed; 590 AA.
AC G9IHB3;
DT 22-FEB-2012, integrated into UniProtKB/TrEMBL.
DT 22-FEB-2012, sequence version 1.
DT 27-MAR-2024, entry version 33.
DE SubName: Full=Phytochrome P {ECO:0000313|EMBL:AEW26983.1};
DE Flags: Fragment;
GN Name=PHYP {ECO:0000313|EMBL:AEW26983.1};
OS Zamia skinneri (Cycad).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Cycadidae; Cycadales; Zamiaceae; Zamia.
OX NCBI_TaxID=115902 {ECO:0000313|EMBL:AEW26983.1};
RN [1] {ECO:0000313|EMBL:AEW26983.1}
RP NUCLEOTIDE SEQUENCE.
RX PubMed=22021670; DOI=10.1126/science.1209926;
RA Nagalingum N.S., Marshall C.R., Quental T.B., Rai H.S., Little D.P.,
RA Mathews S.;
RT "Recent synchronous radiation of a living fossil.";
RL Science 334:796-799(2011).
CC -!- SIMILARITY: Belongs to the phytochrome family.
CC {ECO:0000256|ARBA:ARBA00008235}.
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DR EMBL; JN656087; AEW26983.1; -; Genomic_DNA.
DR AlphaFoldDB; G9IHB3; -.
DR GO; GO:0009881; F:photoreceptor activity; IEA:UniProtKB-KW.
DR GO; GO:0009584; P:detection of visible light; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00130; PAS; 1.
DR Gene3D; 3.30.450.270; -; 1.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 3.30.450.20; PAS domain; 2.
DR InterPro; IPR003018; GAF.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013654; PAS_2.
DR InterPro; IPR013767; PAS_fold.
DR InterPro; IPR016132; Phyto_chromo_attachment.
DR InterPro; IPR013516; Phyto_chromo_BS.
DR InterPro; IPR001294; Phytochrome.
DR InterPro; IPR013515; Phytochrome_cen-reg.
DR InterPro; IPR043150; Phytochrome_PHY_sf.
DR PANTHER; PTHR47876; OS08G0260000 PROTEIN; 1.
DR PANTHER; PTHR47876:SF3; PHYTOCHROME 1; 1.
DR Pfam; PF01590; GAF; 1.
DR Pfam; PF00989; PAS; 1.
DR Pfam; PF08446; PAS_2; 1.
DR Pfam; PF00360; PHY; 1.
DR PRINTS; PR01033; PHYTOCHROME.
DR SMART; SM00065; GAF; 1.
DR SMART; SM00091; PAS; 1.
DR SUPFAM; SSF55781; GAF domain-like; 2.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 2.
DR PROSITE; PS50112; PAS; 1.
DR PROSITE; PS00245; PHYTOCHROME_1; 1.
DR PROSITE; PS50046; PHYTOCHROME_2; 1.
PE 3: Inferred from homology;
KW Chromophore {ECO:0000256|ARBA:ARBA00022991};
KW Photoreceptor protein {ECO:0000256|ARBA:ARBA00022543};
KW Receptor {ECO:0000256|ARBA:ARBA00023170};
KW Sensory transduction {ECO:0000256|ARBA:ARBA00022606};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 137..295
FT /note="Phytochrome chromophore attachment site"
FT /evidence="ECO:0000259|PROSITE:PS50046"
FT DOMAIN 520..590
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:AEW26983.1"
FT NON_TER 590
FT /evidence="ECO:0000313|EMBL:AEW26983.1"
SQ SEQUENCE 590 AA; 65010 MW; CFBC16BB3FD5B2F6 CRC64;
KIQPLGCMLA VEERTFRIIA YSENAVGMLD LAPQSVPTME RELLTIGTDV RTLFTPASAL
SLEKAAAAQE ISLMNPVWMH SKSSGKPFYA ILHRIDVGMV IDFEPVGGAA MSVAGAVQSQ
KLAVRAISRL QALPGGDIGL LCDTVVEDVR ELTGYDRVMV YRFHEDEHGE VVAEIRRSDL
EPYLGLHYPA TDIPQASRFL FMQNRVRMIC DCRATPVRVI QAAELRQPLC LVGSTLRAPH
GCHAQYMANM GSVASLVMAV VMNVNMKLWG LVVCHHTSPR AVPFPVRYAC EFLMQAFGLQ
LNMELQLAAQ LTEKNILKTQ TLLCDMLLRD APIGIVTQSP SIMDLVKCDG AALYYGGMVW
MLGVTPTEAQ IKDIADWLLE CHGDWTGLST DSLADAGYPG AASLGDAVCG MAAARITAKD
FLFWFRSHTA KEIKWGGAKH HPDDKDEGRR MHPRSSFKAF LEVVKRRSLP WENVEMDAIH
SLQLILRGSF QDIDDSKTKT MIHSRLTDLR LQSMDELSSV ASEMVRLIET ATAPILAVDS
GGFVNGWNAK LAELTGLPVG EAMGKSLVCD LIYEESMETV ERLLHHALRG
//
