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Database: UniProt
Entry: G9NDI5_HYPVG
LinkDB: G9NDI5_HYPVG
Original site: G9NDI5_HYPVG 
ID   G9NDI5_HYPVG            Unreviewed;       962 AA.
AC   G9NDI5;
DT   22-FEB-2012, integrated into UniProtKB/TrEMBL.
DT   22-FEB-2012, sequence version 1.
DT   24-JAN-2024, entry version 49.
DE   RecName: Full=Small-subunit processome Utp12 domain-containing protein {ECO:0000259|Pfam:PF04003};
GN   ORFNames=TRIVIDRAFT_56214 {ECO:0000313|EMBL:EHK15752.1};
OS   Hypocrea virens (strain Gv29-8 / FGSC 10586) (Gliocladium virens)
OS   (Trichoderma virens).
OC   Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes;
OC   Hypocreomycetidae; Hypocreales; Hypocreaceae; Trichoderma.
OX   NCBI_TaxID=413071 {ECO:0000313|EMBL:EHK15752.1, ECO:0000313|Proteomes:UP000007115};
RN   [1] {ECO:0000313|EMBL:EHK15752.1, ECO:0000313|Proteomes:UP000007115}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Gv29-8 / FGSC 10586 {ECO:0000313|Proteomes:UP000007115};
RX   PubMed=21501500; DOI=10.1186/gb-2011-12-4-r40;
RA   Kubicek C.P., Herrera-Estrella A., Seidl-Seiboth V., Martinez D.A.,
RA   Druzhinina I.S., Thon M., Zeilinger S., Casas-Flores S., Horwitz B.A.,
RA   Mukherjee P.K., Mukherjee M., Kredics L., Alcaraz L.D., Aerts A., Antal Z.,
RA   Atanasova L., Cervantes-Badillo M.G., Challacombe J., Chertkov O.,
RA   McCluskey K., Coulpier F., Deshpande N., von Doehren H., Ebbole D.J.,
RA   Esquivel-Naranjo E.U., Fekete E., Flipphi M., Glaser F.,
RA   Gomez-Rodriguez E.Y., Gruber S., Han C., Henrissat B., Hermosa R.,
RA   Hernandez-Onate M., Karaffa L., Kosti I., Le Crom S., Lindquist E.,
RA   Lucas S., Luebeck M., Luebeck P.S., Margeot A., Metz B., Misra M.,
RA   Nevalainen H., Omann M., Packer N., Perrone G., Uresti-Rivera E.E.,
RA   Salamov A., Schmoll M., Seiboth B., Shapiro H., Sukno S.,
RA   Tamayo-Ramos J.A., Tisch D., Wiest A., Wilkinson H.H., Zhang M.,
RA   Coutinho P.M., Kenerley C.M., Monte E., Baker S.E., Grigoriev I.V.;
RT   "Comparative genome sequence analysis underscores mycoparasitism as the
RT   ancestral life style of Trichoderma.";
RL   Genome Biol. 12:R40.1-R40.15(2011).
CC   -!- SIMILARITY: Belongs to the WD repeat WDR3/UTP12 family.
CC       {ECO:0000256|ARBA:ARBA00038229}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:EHK15752.1}.
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DR   EMBL; ABDF02000092; EHK15752.1; -; Genomic_DNA.
DR   RefSeq; XP_013949945.1; XM_014094470.1.
DR   AlphaFoldDB; G9NDI5; -.
DR   STRING; 413071.G9NDI5; -.
DR   EnsemblFungi; EHK15752; EHK15752; TRIVIDRAFT_56214.
DR   GeneID; 25795600; -.
DR   VEuPathDB; FungiDB:TRIVIDRAFT_56214; -.
DR   eggNOG; KOG0306; Eukaryota.
DR   HOGENOM; CLU_005318_0_1_1; -.
DR   InParanoid; G9NDI5; -.
DR   OMA; MQCLRTV; -.
DR   OrthoDB; 168440at2759; -.
DR   Proteomes; UP000007115; Unassembled WGS sequence.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR   GO; GO:0034388; C:Pwp2p-containing subcomplex of 90S preribosome; IEA:EnsemblFungi.
DR   GO; GO:0032040; C:small-subunit processome; IEA:EnsemblFungi.
DR   GO; GO:0034511; F:U3 snoRNA binding; IEA:EnsemblFungi.
DR   GO; GO:0000480; P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IEA:EnsemblFungi.
DR   GO; GO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IEA:EnsemblFungi.
DR   GO; GO:0000472; P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IEA:EnsemblFungi.
DR   CDD; cd00200; WD40; 1.
DR   Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 5.
DR   InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR   InterPro; IPR007148; SSU_processome_Utp12.
DR   InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR   InterPro; IPR019775; WD40_repeat_CS.
DR   InterPro; IPR036322; WD40_repeat_dom_sf.
DR   InterPro; IPR001680; WD40_rpt.
DR   PANTHER; PTHR19853; WD REPEAT CONTAINING PROTEIN 3 WDR3; 1.
DR   PANTHER; PTHR19853:SF0; WD REPEAT-CONTAINING PROTEIN 3; 1.
DR   Pfam; PF04003; Utp12; 1.
DR   Pfam; PF00400; WD40; 8.
DR   PRINTS; PR00320; GPROTEINBRPT.
DR   SMART; SM00320; WD40; 12.
DR   SUPFAM; SSF117289; Nucleoporin domain; 1.
DR   SUPFAM; SSF50978; WD40 repeat-like; 1.
DR   PROSITE; PS00678; WD_REPEATS_1; 3.
DR   PROSITE; PS50082; WD_REPEATS_2; 8.
DR   PROSITE; PS50294; WD_REPEATS_REGION; 5.
PE   3: Inferred from homology;
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000007115};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius};
KW   WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW   ProRule:PRU00221}.
FT   TRANSMEM        846..866
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   REPEAT          106..139
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          187..210
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          273..314
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          423..463
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          504..538
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          603..644
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          645..691
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          692..724
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   DOMAIN          827..927
FT                   /note="Small-subunit processome Utp12"
FT                   /evidence="ECO:0000259|Pfam:PF04003"
FT   REGION          315..345
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   962 AA;  107391 MW;  2A9B2418724DDFA1 CRC64;
     MVKSYLKYEH AKSFGTILSS SSNLVWTSKD RTGTGAGQAI TAANEEVLCW DIKKGELTGR
     WRDERCSYPV TAIAQSGVDK DMFAVGYEDG SIRIWDSKIA TVLVNFNGHK SAITHLVFDK
     SGVRLASGSK DTDIIVWDLV AEVGQFKLRG HKDQITGLRF LEPEPKVSDE DGNKAMILNG
     EDAADGFLLS TGKDSLLKLW DLSSRHCIET HISQTNGECW ALGVSPDLSG CITAGNDGEM
     KVWSLDTDGL SSTAQRVEVN ASAQFLQDRG TLFRQNKDRA TEVIFHPQRD YFAVHGSDKS
     VDIWRIRSES EVKKGLARKR RRRREKQKDA KNDDEDMENG DDAQDDVSKA DISDVFVQYV
     ILRTGGKVRS IDWALPAGQK QIHLVVGTTN NQLEYYNVQP KEKSDKKSKD DIPDYTKAFS
     VEIPGHRADI RALSLSSDDK MLASASNGLL KIWNIKTQTC IRTFECGYAL CCAFLPGDKV
     VVVGTKNGEL QLFDVASASL LDSVEAHEGA IWALQVHPDG RSVVSGSADK SAKFWDFKIV
     QEQVLGTKRT TPKLKLVQSR TLKVSDDILS LRFSPDAKLL AVSLLDSTVK VFFVDSLKLY
     LNLYGHKLPV LSMDISYDSK LIVTSSADKN IRIWGLDFGD CHKALFGHQD SILQVAFVPH
     NSDGNGHHFF SSGKDRTIRY WDGDKFEQIQ RLDGHHGEVW SIAMSHSGNF LVTASHDKSI
     RVWDETDEQI FLEEEREKEM EELYESTLTA SLEKDPEGGD ENGEVAAAGK QTTETLMAGE
     RIAEALEMGM ADLNLLKEYE EAKLTNPHAM PPQRNPVFLA LGNITAEAYV MSVLQRIKAS
     ALHDALLVLP FASVPILFTF INIFAMRSMN IPLTCRILFF MLKTHHKQIV ASRTMKVMMD
     GIRTNLRAAL KKQKDEMGVN IAALKVVGMQ IREKSVKEYV DETWEEESRE RSAKKRAFVH
     VA
//
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