ID H0TYZ6_9BRAD Unreviewed; 307 AA.
AC H0TYZ6;
DT 22-FEB-2012, integrated into UniProtKB/TrEMBL.
DT 22-FEB-2012, sequence version 1.
DT 24-JAN-2024, entry version 50.
DE SubName: Full=Transcriptional regulatory protein {ECO:0000313|EMBL:CCE11684.1};
GN ORFNames=BRAS3843_750007 {ECO:0000313|EMBL:CCE11684.1};
OS Bradyrhizobium sp. STM 3843.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
OC Nitrobacteraceae; Bradyrhizobium.
OX NCBI_TaxID=551947 {ECO:0000313|EMBL:CCE11684.1, ECO:0000313|Proteomes:UP000002686};
RN [1] {ECO:0000313|Proteomes:UP000002686}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=STM3843 {ECO:0000313|Proteomes:UP000002686};
RX PubMed=24704842; DOI=10.3390/genes3010035;
RA Mornico D., Miche L., Bena G., Nouwen N., Vermeglio A., Vallenet D.,
RA Smith A.A., Giraud E., Medigue C., Moulin L.;
RT "Comparative genomics of aeschynomene symbionts: insights into the
RT ecological lifestyle of nod-independent photosynthetic bradyrhizobia.";
RL Genes (Basel) 3:35-61(2011).
CC -!- FUNCTION: NodD regulates the expression of the nodABCFE genes which
CC encode other nodulation proteins. NodD is also a negative regulator of
CC its own expression. Binds flavonoids as inducers.
CC {ECO:0000256|ARBA:ARBA00003502}.
CC -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC {ECO:0000256|ARBA:ARBA00009437}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CCE11684.1}.
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DR EMBL; CAFK01000324; CCE11684.1; -; Genomic_DNA.
DR RefSeq; WP_008974191.1; NZ_CAFK01000324.1.
DR AlphaFoldDB; H0TYZ6; -.
DR OrthoDB; 9811588at2; -.
DR Proteomes; UP000002686; Unassembled WGS sequence.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR CDD; cd08450; PBP2_HcaR; 1.
DR Gene3D; 3.40.190.10; Periplasmic binding protein-like II; 2.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR005119; LysR_subst-bd.
DR InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR30346:SF0; HCA OPERON TRANSCRIPTIONAL ACTIVATOR HCAR; 1.
DR PANTHER; PTHR30346; TRANSCRIPTIONAL DUAL REGULATOR HCAR-RELATED; 1.
DR Pfam; PF00126; HTH_1; 1.
DR Pfam; PF03466; LysR_substrate; 1.
DR PRINTS; PR00039; HTHLYSR.
DR SUPFAM; SSF53850; Periplasmic binding protein-like II; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50931; HTH_LYSR; 1.
PE 3: Inferred from homology;
KW Activator {ECO:0000256|ARBA:ARBA00023159};
KW Reference proteome {ECO:0000313|Proteomes:UP000002686}.
FT DOMAIN 1..59
FT /note="HTH lysR-type"
FT /evidence="ECO:0000259|PROSITE:PS50931"
SQ SEQUENCE 307 AA; 33695 MW; C9E0A5C566E55517 CRC64;
MELRHLRYFI AVVEEGSLLT AAQRRLNTSQ PSLSRQIRDL ESEVGVQLLE RQARGVALTP
AGRVFLDHAR LALLQVEAAT DGARRTAQPQ RPVLSMGFLV GLEVMWLPHL LRILREEAPE
VEVTLSTQSS PELALALMRG RLDVAFLRPE KDSAGLVYKM LAKEPLIAVL PADHRLASRK
KIRPQDLARE IYVSSARTSP VLQAVIEDYA SRVGIALKPK YEGENISSAM SLVASTGGIS
LVPLYAQNML APNVVARALD GGTPTVDLAL GYNQANSSPL LRRLLSRADE LIANVQNQSI
IRYVEAQ
//
