GenomeNet

Database: UniProt
Entry: H0WP14_OTOGA
LinkDB: H0WP14_OTOGA
Original site: H0WP14_OTOGA 
ID   H0WP14_OTOGA            Unreviewed;       692 AA.
AC   H0WP14;
DT   22-FEB-2012, integrated into UniProtKB/TrEMBL.
DT   22-FEB-2012, sequence version 1.
DT   24-JAN-2024, entry version 55.
DE   RecName: Full=Small ribosomal subunit protein mS39 {ECO:0000256|ARBA:ARBA00035134};
GN   Name=PTCD3 {ECO:0000313|Ensembl:ENSOGAP00000003603.2};
OS   Otolemur garnettii (Small-eared galago) (Garnett's greater bushbaby).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lorisiformes;
OC   Galagidae; Otolemur.
OX   NCBI_TaxID=30611 {ECO:0000313|Ensembl:ENSOGAP00000003603.2, ECO:0000313|Proteomes:UP000005225};
RN   [1] {ECO:0000313|Proteomes:UP000005225}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RG   The Broad Institute Genome Sequencing Platform;
RA   Di Palma F., Johnson J., Lander E.S., Lindblad-Toh K., Jaffe D.B.,
RA   Gnerre S., MacCallum I., Przybylski D., Ribeiro F.J., Burton J.N.,
RA   Walker B.J., Sharpe T., Hall G.;
RT   "Version 3 of the genome sequence of Otolemur garnettii (Bushbaby).";
RL   Submitted (MAR-2011) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|Ensembl:ENSOGAP00000003603.2}
RP   IDENTIFICATION.
RG   Ensembl;
RL   Submitted (JUL-2023) to UniProtKB.
CC   -!- SUBCELLULAR LOCATION: Mitochondrion {ECO:0000256|ARBA:ARBA00004173}.
CC   -!- SIMILARITY: Belongs to the mitochondrion-specific ribosomal protein
CC       mS39 family. {ECO:0000256|ARBA:ARBA00008551}.
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DR   EMBL; AAQR03151254; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AAQR03151255; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   RefSeq; XP_012666449.1; XM_012810995.1.
DR   AlphaFoldDB; H0WP14; -.
DR   STRING; 30611.ENSOGAP00000003603; -.
DR   Ensembl; ENSOGAT00000004045.2; ENSOGAP00000003603.2; ENSOGAG00000004040.2.
DR   GeneID; 100950863; -.
DR   KEGG; oga:100950863; -.
DR   CTD; 55037; -.
DR   eggNOG; KOG4422; Eukaryota.
DR   GeneTree; ENSGT00390000016876; -.
DR   HOGENOM; CLU_026264_0_1_1; -.
DR   InParanoid; H0WP14; -.
DR   OMA; MDVCRNH; -.
DR   OrthoDB; 2966953at2759; -.
DR   TreeFam; TF320158; -.
DR   Proteomes; UP000005225; Unassembled WGS sequence.
DR   GO; GO:0005829; C:cytosol; IEA:Ensembl.
DR   GO; GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
DR   GO; GO:0005654; C:nucleoplasm; IEA:Ensembl.
DR   GO; GO:0005886; C:plasma membrane; IEA:Ensembl.
DR   GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR   GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR   GO; GO:0043024; F:ribosomal small subunit binding; IEA:Ensembl.
DR   GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0032543; P:mitochondrial translation; IEA:Ensembl.
DR   GO; GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 2.
DR   InterPro; IPR002885; Pentatricopeptide_rpt.
DR   InterPro; IPR037387; PTCD3.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   PANTHER; PTHR16276; PENTATRICOPEPTIDE REPEAT DOMAIN-CONTAINING PROTEIN 3; 1.
DR   PANTHER; PTHR16276:SF1; PENTATRICOPEPTIDE REPEAT DOMAIN-CONTAINING PROTEIN 3, MITOCHONDRIAL; 1.
DR   Pfam; PF13812; PPR_3; 1.
DR   PROSITE; PS51375; PPR; 1.
PE   3: Inferred from homology;
KW   Mitochondrion {ECO:0000256|ARBA:ARBA00023128};
KW   Reference proteome {ECO:0000313|Proteomes:UP000005225};
KW   Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274};
KW   Ribosomal protein {ECO:0000256|ARBA:ARBA00022980};
KW   RNA-binding {ECO:0000256|ARBA:ARBA00022884};
KW   rRNA-binding {ECO:0000256|ARBA:ARBA00022730};
KW   Translation regulation {ECO:0000256|ARBA:ARBA00022845}.
FT   REPEAT          328..364
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REGION          662..692
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        662..684
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   692 AA;  78693 MW;  44A732DDB2963221 CRC64;
     MAASVSFSIR SRLFLSLKGQ RAGLCEQISS FRFYSGSATL PKIEGTDVTR IEEVVIPRKK
     SWDKVAVLQA LASTVNRDTT AAPYAFQDDP YLIPASSVES RSFLLAKKSG ENAAKFIINS
     HPKYFQKDIA EPHIPCLMPE CFEPRIEEVS EAALKERIKL KKVKASVDMF DQLLQAGTTV
     SLETTNNLLD LLCYYGDQEP STDYSFQQTE QSEELEEESN KKFRRKAGHQ IGATWSAKNN
     AERIFTLMPE KNSHSYCTVI RGMVKHRAYE PALNLYTELL NNRIHADVFT FNALIEATIL
     GLDVDFEEKW NKTLELLKQM VAQKVKPNLQ TFNTILKCLR RFHVFAKFPA LKTLREMKAI
     GIEPSLATYH HIIQLFYQRE NISKGSSLII YDIMSELMGK KFSPRDLDDG MFFQSAMRVC
     SSLRDLELAY QVHSLLNTGD NRKFIGPDYR RHFYYSKFFT LICLMEQIDV TLKWYKDLIP
     SVFFPHSQTL IDLLQALDVA NRLEVIPQIW KDSKECGHTF HSDLKEEILI LMARDKHPPK
     LQEEFADCAA DIKSAYESQD GRQTAPDWPA IPLNCIAVLF LRAGRTQEAW KMLGLFRKHN
     KIPRNELLNE FMDSAEASNS PAQAIEVVKL ASAFSLPICE SLSQRVMTDF AINQEQKEAL
     ENLTALTSDS DSDSDSSSDS SSDSDSDINE GK
//
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