ID H0Y940_HUMAN Unreviewed; 259 AA.
AC H0Y940;
DT 22-FEB-2012, integrated into UniProtKB/TrEMBL.
DT 22-FEB-2012, sequence version 1.
DT 27-MAR-2024, entry version 60.
DE SubName: Full=Collagen type VI alpha 6 chain {ECO:0000313|Ensembl:ENSP00000422921.1};
DE Flags: Fragment;
GN Name=COL6A6 {ECO:0000313|Ensembl:ENSP00000422921.1};
OS Homo sapiens (Human).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
OX NCBI_TaxID=9606 {ECO:0000313|Ensembl:ENSP00000422921.1, ECO:0000313|Proteomes:UP000005640};
RN [1] {ECO:0000313|Ensembl:ENSP00000422921.1, ECO:0000313|Proteomes:UP000005640}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=16641997; DOI=10.1038/nature04728;
RA Muzny D.M., Scherer S.E., Kaul R., Wang J., Yu J., Sudbrak R., Buhay C.J.,
RA Chen R., Cree A., Ding Y., Dugan-Rocha S., Gill R., Gunaratne P.,
RA Harris R.A., Hawes A.C., Hernandez J., Hodgson A.V., Hume J., Jackson A.,
RA Khan Z.M., Kovar-Smith C., Lewis L.R., Lozado R.J., Metzker M.L.,
RA Milosavljevic A., Miner G.R., Morgan M.B., Nazareth L.V., Scott G.,
RA Sodergren E., Song X.Z., Steffen D., Wei S., Wheeler D.A., Wright M.W.,
RA Worley K.C., Yuan Y., Zhang Z., Adams C.Q., Ansari-Lari M.A., Ayele M.,
RA Brown M.J., Chen G., Chen Z., Clendenning J., Clerc-Blankenburg K.P.,
RA Chen R., Chen Z., Davis C., Delgado O., Dinh H.H., Dong W., Draper H.,
RA Ernst S., Fu G., Gonzalez-Garay M.L., Garcia D.K., Gillett W., Gu J.,
RA Hao B., Haugen E., Havlak P., He X., Hennig S., Hu S., Huang W.,
RA Jackson L.R., Jacob L.S., Kelly S.H., Kube M., Levy R., Li Z., Liu B.,
RA Liu J., Liu W., Lu J., Maheshwari M., Nguyen B.V., Okwuonu G.O.,
RA Palmeiri A., Pasternak S., Perez L.M., Phelps K.A., Plopper F.J., Qiang B.,
RA Raymond C., Rodriguez R., Saenphimmachak C., Santibanez J., Shen H.,
RA Shen Y., Subramanian S., Tabor P.E., Verduzco D., Waldron L., Wang J.,
RA Wang J., Wang Q., Williams G.A., Wong G.K., Yao Z., Zhang J., Zhang X.,
RA Zhao G., Zhou J., Zhou Y., Nelson D., Lehrach H., Reinhardt R.,
RA Naylor S.L., Yang H., Olson M., Weinstock G., Gibbs R.A.;
RT "The DNA sequence, annotation and analysis of human chromosome 3.";
RL Nature 440:1194-1198(2006).
RN [2] {ECO:0007829|PubMed:24275569}
RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RX PubMed=24275569; DOI=10.1016/j.jprot.2013.11.014;
RA Bian Y., Song C., Cheng K., Dong M., Wang F., Huang J., Sun D., Wang L.,
RA Ye M., Zou H.;
RT "An enzyme assisted RP-RPLC approach for in-depth analysis of human liver
RT phosphoproteome.";
RL J. Proteomics 96:253-262(2014).
RN [3] {ECO:0000313|Ensembl:ENSP00000422921.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
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DR EMBL; AC093006; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AC117398; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AC128683; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR MassIVE; H0Y940; -.
DR PeptideAtlas; H0Y940; -.
DR ProteomicsDB; 35901; -.
DR Antibodypedia; 56016; 62 antibodies from 11 providers.
DR Ensembl; ENST00000511332.1; ENSP00000422921.1; ENSG00000206384.11.
DR UCSC; uc062nub.1; human.
DR HGNC; HGNC:27023; COL6A6.
DR VEuPathDB; HostDB:ENSG00000206384; -.
DR GeneTree; ENSGT00940000155619; -.
DR ChiTaRS; COL6A6; human.
DR Proteomes; UP000005640; Chromosome 3.
DR Bgee; ENSG00000206384; Expressed in buccal mucosa cell and 94 other cell types or tissues.
DR ExpressionAtlas; H0Y940; baseline and differential.
DR InterPro; IPR008160; Collagen.
DR InterPro; IPR036465; vWFA_dom_sf.
DR PANTHER; PTHR37456:SF5; -; 1.
DR PANTHER; PTHR37456; SI:CH211-266K2.1; 1.
DR Pfam; PF01391; Collagen; 2.
DR SUPFAM; SSF53300; vWA-like; 1.
PE 1: Evidence at protein level;
KW Proteomics identification {ECO:0007829|MaxQB:H0Y940,
KW ECO:0007829|PeptideAtlas:H0Y940};
KW Reference proteome {ECO:0000313|Proteomes:UP000005640}.
FT REGION 177..259
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|Ensembl:ENSP00000422921.1"
FT NON_TER 259
FT /evidence="ECO:0000313|Ensembl:ENSP00000422921.1"
SQ SEQUENCE 259 AA; 27790 MW; 79BC4C86B17FEE04 CRC64;
XTNAMEKYSP KFEIYSENIL NSLKDITVKG PSLLNANLLD SLWDTFQNKS AARGKVVLLF
SDGLDDDVEK LEQKSDELRK EGLNALITVA LDGPADSSDL ADLPYIEFGK GFEYRTQLSI
GMRELGSRLS KQLVNVAERT CCCLFCKCIG GDGTMGDPGP PGKRLHVKRV VDFFKKQGSE
RMERKGPPGF KGSEGYLGEE GIAGERGAPG PVGEQGTKGC YGTKGPKGNR GLNGQEGEVG
ENGIDGLNGE QGDNGLPGR
//
