ID H1KGP5_METEX Unreviewed; 251 AA.
AC H1KGP5;
DT 21-MAR-2012, integrated into UniProtKB/TrEMBL.
DT 21-MAR-2012, sequence version 1.
DT 24-JAN-2024, entry version 45.
DE RecName: Full=Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077};
GN Name=rimP {ECO:0000256|HAMAP-Rule:MF_01077};
GN ORFNames=MetexDRAFT_1807 {ECO:0000313|EMBL:EHP93282.1};
OS Methylorubrum extorquens DSM 13060.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
OC Methylobacteriaceae; Methylorubrum.
OX NCBI_TaxID=882800 {ECO:0000313|EMBL:EHP93282.1, ECO:0000313|Proteomes:UP000004382};
RN [1] {ECO:0000313|EMBL:EHP93282.1, ECO:0000313|Proteomes:UP000004382}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 13060 {ECO:0000313|EMBL:EHP93282.1,
RC ECO:0000313|Proteomes:UP000004382};
RG US DOE Joint Genome Institute (JGI-PGF);
RA Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S.,
RA Peters L., Land M.L., Hauser L., Koskimaki J., Halonen O., Pirttila A.,
RA Frank C., Woyke T.J.;
RT "The draft genome of Methylobacterium extorquens DSM 13060.";
RL Submitted (SEP-2011) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Required for maturation of 30S ribosomal subunits.
CC {ECO:0000256|HAMAP-Rule:MF_01077}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|HAMAP-Rule:MF_01077}.
CC -!- SIMILARITY: Belongs to the RimP family. {ECO:0000256|HAMAP-
CC Rule:MF_01077}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EHP93282.1}.
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DR EMBL; AGJK01000035; EHP93282.1; -; Genomic_DNA.
DR RefSeq; WP_003598935.1; NZ_AGJK01000035.1.
DR AlphaFoldDB; H1KGP5; -.
DR SMR; H1KGP5; -.
DR PATRIC; fig|882800.3.peg.1773; -.
DR Proteomes; UP000004382; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0042274; P:ribosomal small subunit biogenesis; IEA:UniProtKB-UniRule.
DR CDD; cd01734; YlxS_C; 1.
DR Gene3D; 3.30.300.70; RimP-like superfamily, N-terminal; 1.
DR HAMAP; MF_01077; RimP; 1.
DR InterPro; IPR003728; Ribosome_maturation_RimP.
DR InterPro; IPR028998; RimP_C.
DR InterPro; IPR036847; RimP_C_sf.
DR InterPro; IPR028989; RimP_N.
DR InterPro; IPR035956; RimP_N_sf.
DR PANTHER; PTHR33867; RIBOSOME MATURATION FACTOR RIMP; 1.
DR PANTHER; PTHR33867:SF1; RIBOSOME MATURATION FACTOR RIMP; 1.
DR Pfam; PF17384; DUF150_C; 1.
DR Pfam; PF02576; RimP_N; 1.
DR SUPFAM; SSF74942; YhbC-like, C-terminal domain; 1.
DR SUPFAM; SSF75420; YhbC-like, N-terminal domain; 1.
PE 3: Inferred from homology;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490, ECO:0000256|HAMAP-Rule:MF_01077};
KW Ribosome biogenesis {ECO:0000256|ARBA:ARBA00022517, ECO:0000256|HAMAP-
KW Rule:MF_01077}.
FT DOMAIN 22..94
FT /note="Ribosome maturation factor RimP N-terminal"
FT /evidence="ECO:0000259|Pfam:PF02576"
FT DOMAIN 97..169
FT /note="Ribosome maturation factor RimP C-terminal"
FT /evidence="ECO:0000259|Pfam:PF17384"
FT REGION 176..251
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 212..230
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 251 AA; 27340 MW; A9022DA181449D26 CRC64;
MAEPTEKRLV SETGVAARVA QIVEGPIEGL GFRLVRVKIS NTNGRTVQIM AERPDGTMGV
DECEAVSRAI SPILDLEDPV GDAYYLEVSS PGIDRPLVRV SDFERWAGYE AKVELAVPMD
GRKRFRGIIG VPSADGTTVP IDLPDVKPGL PSRIDVPLRD LGEAHLVLTD ELIRESLRRG
SAPPQDGEEG DEEEGAEAEH EAPQVRFIPQ PKRPKPKLDK KSDKPVKAKK PKPGGGIVTK
AARLKNRDTL H
//
