ID H1YWR7_9EURY Unreviewed; 136 AA.
AC H1YWR7;
DT 21-MAR-2012, integrated into UniProtKB/TrEMBL.
DT 21-MAR-2012, sequence version 1.
DT 24-JAN-2024, entry version 39.
DE SubName: Full=DNA binding protein, Tfx family {ECO:0000313|EMBL:EHQ36808.1};
GN ORFNames=Metlim_2773 {ECO:0000313|EMBL:EHQ36808.1};
OS Methanoplanus limicola DSM 2279.
OC Archaea; Euryarchaeota; Stenosarchaea group; Methanomicrobia;
OC Methanomicrobiales; Methanomicrobiaceae; Methanoplanus.
OX NCBI_TaxID=937775 {ECO:0000313|EMBL:EHQ36808.1, ECO:0000313|Proteomes:UP000005741};
RN [1] {ECO:0000313|EMBL:EHQ36808.1, ECO:0000313|Proteomes:UP000005741}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 2279 {ECO:0000313|EMBL:EHQ36808.1,
RC ECO:0000313|Proteomes:UP000005741};
RG US DOE Joint Genome Institute (JGI-PGF);
RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA Bruce D., Goodwin L., Pitluck S., Peters L., Mikhailova N., Lu M.,
RA Kyrpides N., Mavromatis K., Ivanova N., Markowitz V., Cheng J.-F.,
RA Hugenholtz P., Woyke T., Wu D., Wirth R., Brambilla E.-M., Klenk H.-P.,
RA Eisen J.A.;
RT "The Improved High-Quality Draft genome of Methanoplanus limicola DSM
RT 2279.";
RL Submitted (OCT-2011) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM001436; EHQ36808.1; -; Genomic_DNA.
DR AlphaFoldDB; H1YWR7; -.
DR STRING; 937775.Metlim_2773; -.
DR HOGENOM; CLU_125807_1_0_2; -.
DR InParanoid; H1YWR7; -.
DR Proteomes; UP000005741; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR Gene3D; 3.30.1190.10; DNA-binding protein Tfx superfamily, archaea; 1.
DR InterPro; IPR007630; RNA_pol_sigma70_r4.
DR InterPro; IPR029291; Tfx_C.
DR InterPro; IPR004645; Tfx_DNA-bd_arc.
DR InterPro; IPR018384; Tfx_DNA-bd_euryarc.
DR InterPro; IPR036657; Tfx_DNA-bd_sf_arc.
DR NCBIfam; TIGR00721; tfx; 1.
DR Pfam; PF04545; Sigma70_r4; 1.
DR Pfam; PF14601; TFX_C; 1.
DR PIRSF; PIRSF004932; DNA_bind_Tfx; 1.
DR SUPFAM; SSF89915; DNA-binding protein Tfx; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000005741}.
FT DOMAIN 8..52
FT /note="RNA polymerase sigma-70 region 4"
FT /evidence="ECO:0000259|Pfam:PF04545"
FT DOMAIN 53..135
FT /note="DNA binding protein Tfx C-terminal"
FT /evidence="ECO:0000259|Pfam:PF14601"
SQ SEQUENCE 136 AA; 15868 MW; 6DA3DADE11CC94A3 CRC64;
MLMKESLLTD RQKEVLRYRK KGYTQQQIAD VIGTSKANVC TIEKAAMENI KKARETLEFL
FTLDARELCV IKSGSDFIDA ARQIFDDAEK VGIKVRYDTI SLINRMRDSN PEKFRARYIR
NDILVYINDD GEIYFN
//
