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Database: UniProt
Entry: H2INT2_RAHAC
LinkDB: H2INT2_RAHAC
Original site: H2INT2_RAHAC 
ID   H2INT2_RAHAC            Unreviewed;       308 AA.
AC   H2INT2;
DT   21-MAR-2012, integrated into UniProtKB/TrEMBL.
DT   21-MAR-2012, sequence version 1.
DT   24-JAN-2024, entry version 62.
DE   SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:AEX50067.1};
GN   OrderedLocusNames=Rahaq2_0116 {ECO:0000313|EMBL:AEX50067.1};
OS   Rahnella aquatilis (strain ATCC 33071 / DSM 4594 / JCM 1683 / NBRC 105701 /
OS   NCIMB 13365 / CIP 78.65).
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
OC   Yersiniaceae; Rahnella.
OX   NCBI_TaxID=745277 {ECO:0000313|EMBL:AEX50067.1, ECO:0000313|Proteomes:UP000009010};
RN   [1] {ECO:0000313|EMBL:AEX50067.1, ECO:0000313|Proteomes:UP000009010}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 33071 / DSM 4594 / JCM 1683 / NBRC 105701 / NCIMB 13365 /
RC   CIP 78.65 {ECO:0000313|Proteomes:UP000009010};
RX   PubMed=22582378; DOI=10.1128/JB.00380-12;
RA   Martinez R.J., Bruce D., Detter C., Goodwin L.A., Han J., Han C.S.,
RA   Held B., Land M.L., Mikhailova N., Nolan M., Pennacchio L., Pitluck S.,
RA   Tapia R., Woyke T., Sobecky P.A.;
RT   "Complete Genome Sequence of Rahnella aquatilis CIP 78.65.";
RL   J. Bacteriol. 194:3020-3021(2012).
RN   [2] {ECO:0000313|Proteomes:UP000009010}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 33071 / DSM 4594 / JCM 1683 / NBRC 105701 / NCIMB 13365 /
RC   CIP 78.65 {ECO:0000313|Proteomes:UP000009010};
RA   Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S.,
RA   Peters L., Ovchinnikova G., Held B., Detter J.C., Han C., Tapia R.,
RA   Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Sobecky P.,
RA   Martinez R., Woyke T.;
RT   "Complete sequence of chromosome of Rahnella aquatilis CIP 78.65.";
RL   Submitted (JAN-2012) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC       {ECO:0000256|ARBA:ARBA00009437}.
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DR   EMBL; CP003244; AEX50067.1; -; Genomic_DNA.
DR   RefSeq; WP_014333386.1; NZ_JMPO01000141.1.
DR   AlphaFoldDB; H2INT2; -.
DR   STRING; 745277.Rahaq2_0116; -.
DR   GeneID; 61510276; -.
DR   KEGG; raq:Rahaq2_0116; -.
DR   PATRIC; fig|745277.3.peg.110; -.
DR   eggNOG; COG0583; Bacteria.
DR   HOGENOM; CLU_039613_4_1_6; -.
DR   OMA; NCELMFA; -.
DR   OrthoDB; 6971749at2; -.
DR   Proteomes; UP000009010; Chromosome.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   CDD; cd05466; PBP2_LTTR_substrate; 1.
DR   Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR   InterPro; IPR005119; LysR_subst-bd.
DR   InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   PANTHER; PTHR30126; HTH-TYPE TRANSCRIPTIONAL REGULATOR; 1.
DR   PANTHER; PTHR30126:SF2; HTH-TYPE TRANSCRIPTIONAL REGULATOR YJIE; 1.
DR   Pfam; PF00126; HTH_1; 1.
DR   Pfam; PF03466; LysR_substrate; 1.
DR   PRINTS; PR00039; HTHLYSR.
DR   SUPFAM; SSF53850; Periplasmic binding protein-like II; 1.
DR   SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR   PROSITE; PS50931; HTH_LYSR; 1.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000009010};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT   DOMAIN          1..58
FT                   /note="HTH lysR-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50931"
SQ   SEQUENCE   308 AA;  34950 MW;  1B3388EE8C522396 CRC64;
     MELKWFEDFL SVSQCYSFTR AASERNITQS ALSRRIKQLE EWLGVPLFDR KTYPIRLTPQ
     GQDFLHTAAE LVFSMTQLRS DLRERHAQKH TIVHFAALNT LSLTFFPDWI NQIDPSHQYG
     YIRLCDQQPS FSGNISLLLD GETDFLLTYA HDSVPLMKQL ERFPYIELGK ESALAVCAPD
     EDGNPLFALN TSGGTRVQLP YLSYGNRSFF AHALSALFAS RPLPLKPIYE NPMCSGLKAM
     TISGCGVAWL PASLISEELA NGSLIRAGER SWDIQASIRL YRLEKFRTPQ AERLWNKASQ
     LHQTRAVA
//
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