ID H2IRF4_RAHAC Unreviewed; 818 AA.
AC H2IRF4;
DT 21-MAR-2012, integrated into UniProtKB/TrEMBL.
DT 21-MAR-2012, sequence version 1.
DT 27-MAR-2024, entry version 69.
DE SubName: Full=Anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family {ECO:0000313|EMBL:AEX51390.1};
GN OrderedLocusNames=Rahaq2_1511 {ECO:0000313|EMBL:AEX51390.1};
OS Rahnella aquatilis (strain ATCC 33071 / DSM 4594 / JCM 1683 / NBRC 105701 /
OS NCIMB 13365 / CIP 78.65).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
OC Yersiniaceae; Rahnella.
OX NCBI_TaxID=745277 {ECO:0000313|EMBL:AEX51390.1, ECO:0000313|Proteomes:UP000009010};
RN [1] {ECO:0000313|EMBL:AEX51390.1, ECO:0000313|Proteomes:UP000009010}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 33071 / DSM 4594 / JCM 1683 / NBRC 105701 / NCIMB 13365 /
RC CIP 78.65 {ECO:0000313|Proteomes:UP000009010};
RX PubMed=22582378; DOI=10.1128/JB.00380-12;
RA Martinez R.J., Bruce D., Detter C., Goodwin L.A., Han J., Han C.S.,
RA Held B., Land M.L., Mikhailova N., Nolan M., Pennacchio L., Pitluck S.,
RA Tapia R., Woyke T., Sobecky P.A.;
RT "Complete Genome Sequence of Rahnella aquatilis CIP 78.65.";
RL J. Bacteriol. 194:3020-3021(2012).
RN [2] {ECO:0000313|Proteomes:UP000009010}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 33071 / DSM 4594 / JCM 1683 / NBRC 105701 / NCIMB 13365 /
RC CIP 78.65 {ECO:0000313|Proteomes:UP000009010};
RA Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S.,
RA Peters L., Ovchinnikova G., Held B., Detter J.C., Han C., Tapia R.,
RA Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Sobecky P.,
RA Martinez R., Woyke T.;
RT "Complete sequence of chromosome of Rahnella aquatilis CIP 78.65.";
RL Submitted (JAN-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- COFACTOR:
CC Name=Mo-bis(molybdopterin guanine dinucleotide);
CC Xref=ChEBI:CHEBI:60539; Evidence={ECO:0000256|ARBA:ARBA00001942};
CC -!- SIMILARITY: Belongs to the prokaryotic molybdopterin-containing
CC oxidoreductase family. {ECO:0000256|ARBA:ARBA00010312}.
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DR EMBL; CP003244; AEX51390.1; -; Genomic_DNA.
DR RefSeq; WP_015696612.1; NZ_JMPO01000015.1.
DR AlphaFoldDB; H2IRF4; -.
DR STRING; 745277.Rahaq2_1511; -.
DR GeneID; 61511610; -.
DR KEGG; raq:Rahaq2_1511; -.
DR PATRIC; fig|745277.3.peg.1453; -.
DR eggNOG; COG0243; Bacteria.
DR HOGENOM; CLU_000422_13_3_6; -.
DR OrthoDB; 9815647at2; -.
DR Proteomes; UP000009010; Chromosome.
DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:InterPro.
DR GO; GO:0009389; F:dimethyl sulfoxide reductase activity; IEA:InterPro.
DR GO; GO:0030151; F:molybdenum ion binding; IEA:InterPro.
DR GO; GO:0043546; F:molybdopterin cofactor binding; IEA:InterPro.
DR CDD; cd02794; MopB_CT_DmsA-EC; 1.
DR CDD; cd02770; MopB_DmsA-EC; 1.
DR Gene3D; 2.40.40.20; -; 1.
DR Gene3D; 3.40.50.12440; -; 1.
DR Gene3D; 3.40.50.740; -; 1.
DR Gene3D; 3.40.228.10; Dimethylsulfoxide Reductase, domain 2; 2.
DR InterPro; IPR011888; Anaer_DMSO_reductase.
DR InterPro; IPR009010; Asp_de-COase-like_dom_sf.
DR InterPro; IPR006657; MoPterin_dinucl-bd_dom.
DR InterPro; IPR006656; Mopterin_OxRdtase.
DR InterPro; IPR006963; Mopterin_OxRdtase_4Fe-4S_dom.
DR InterPro; IPR006655; Mopterin_OxRdtase_prok_CS.
DR InterPro; IPR006311; TAT_signal.
DR InterPro; IPR049754; YnfE.
DR NCBIfam; TIGR02166; dmsA_ynfE; 1.
DR NCBIfam; NF041885; selenate_YnfE; 1.
DR PANTHER; PTHR43742:SF7; DIMETHYL SULFOXIDE REDUCTASE CHAIN YNFE-RELATED; 1.
DR PANTHER; PTHR43742; TRIMETHYLAMINE-N-OXIDE REDUCTASE; 1.
DR Pfam; PF04879; Molybdop_Fe4S4; 1.
DR Pfam; PF00384; Molybdopterin; 1.
DR Pfam; PF01568; Molydop_binding; 1.
DR SMART; SM00926; Molybdop_Fe4S4; 1.
DR SUPFAM; SSF50692; ADC-like; 1.
DR SUPFAM; SSF53706; Formate dehydrogenase/DMSO reductase, domains 1-3; 1.
DR PROSITE; PS51669; 4FE4S_MOW_BIS_MGD; 1.
DR PROSITE; PS00932; MOLYBDOPTERIN_PROK_3; 1.
DR PROSITE; PS51318; TAT; 1.
PE 3: Inferred from homology;
KW Iron {ECO:0000256|ARBA:ARBA00023004};
KW Iron-sulfur {ECO:0000256|ARBA:ARBA00023014};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Molybdenum {ECO:0000256|ARBA:ARBA00022505};
KW Oxidoreductase {ECO:0000256|ARBA:ARBA00023002};
KW Reference proteome {ECO:0000313|Proteomes:UP000009010};
KW Signal {ECO:0000256|ARBA:ARBA00022729}.
FT DOMAIN 59..120
FT /note="4Fe-4S Mo/W bis-MGD-type"
FT /evidence="ECO:0000259|PROSITE:PS51669"
SQ SEQUENCE 818 AA; 90911 MW; C086E7D4E6D7E539 CRC64;
MSEIKPEITT LTSGISRRTL MKTSTLAGLA IAAGGVSLPF GRKALAQFAN EAKHSVSADK
VVWGACSVNC GSRCALRLHV RDDEVYWVET DNTGQDIYGD HQVRACLRGR SIRRRMNHPE
RLNYPMKRVG KRGEGKFKRI SWEEAFDEIA NNLKRIVAKY GNEAVYINYT SGIVGGNITR
SSPYASLVAR LMNCYGGFLS HYGTYSTAQI ACAMPYTYGS NDGNSTSDIE NSKLIVLFGN
NPAETRMSGG GITYYLEQAR QRSNARMIVI DPRYTDTAAG REDEWIPIRP GTDAALVAGL
AHVLITENMV DQAFLDAYCV GYDEKTLPAD APANSHYKAY ILGQGEDAIA KTPEWASRIT
GIPADRIVKL AREIGQAKPA YISQGWGPQR QANGELTSRA IAMLPILTGN VGINGGNSGA
RESTYTITIE RMPVLENPVK TQISCFSWTD AIARGPQMTA TKDGVRGKDK LDVPIKFIWN
YAGNTITNQH SDINKTHDIL QDDAQCEMIV VLENFMTSSA KYADILLPDL MTVEQEDIIP
NDYAGNMGYL IFIQPATSAK FERKGIYEVM SEVARRLGPD VFNKFTEGRT QREWLQYLYA
KMLAKDPALP AYEELREMGI YKRKDPAGHF VAYKKFRQDP HANPLKTPSG KIEIYSSALA
KIAREWELQK DETISPLPVY ASTFEGWDDP KRSQFPLQMF GFHYKARTHS TYGNIDVLQA
SCRQEVWINP MDAKTRGIEN GDKVKVFNDR GEVRVAAKVT PRIMPGVVAM GQGAWHQANM
SGDRIDHGAC MNTLTTQRPS PLAKGNPQHT NLIQIEKI
//
